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Series GSE79279 Query DataSets for GSE79279
Status Public on Feb 19, 2017
Title Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 28263317
Submission date Mar 16, 2016
Last update date May 15, 2019
Contact name Kun Zhang
E-mail(s) k4zhang@ucsd.edu
Organization name University of California, San Diego
Department Bioengineering
Lab Integrative Genomics Laboratory
Street address 9500 Gilman Dr Mailcode: 0412
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (3)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL15520 Illumina MiSeq (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (159)
GSM2088135 CRC-T-1
GSM2088136 CRC-T-2
GSM2088137 CRC-T-3
This SuperSeries is composed of the following SubSeries:
GSE79211 Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [Tumor RRBS]
GSE79215 Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [WGBS]
GSE79277 Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [Plasma RRBS]
Relations
BioProject PRJNA315380

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79279_RAW.tar 570.0 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp

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