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Series GSE79477 Query DataSets for GSE79477
Status Public on Feb 14, 2017
Title Interaction between cyclooxygenase-2 and caspase-3 abolishes the cleavage of RNA-binding protein HuR and promotes drug resistance in oral squamous cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Here, we show that HuR cleavage is dependent on active caspase-3 in oral cancer cells treated with ionizing radiation and the chemotherapeutic drug paclitaxel. We determined that oral cancer cells overexpressing cyclooxygenase-2 (COX-2) limited the cleavage of both caspase-3 and HuR, which in turn, reduced the rate of apoptosis in paclitaxel treated cells. Specific inhibition of COX-2 by celecoxib promoted apoptosis through activation of caspase-3 and cleavage of HuR in paclitaxel-resistant oral cancer cells. In addition, oral cancer cells overexpressing cellular HuR increased the half-life of COX-2 mRNA and promoted COX-2 expression, exhibiting enhanced tumor growth in vivo in comparison with the cleavable form of HuR. Finally, our RNP IP and RNA transcriptome analysis of HuR under IR revealed that the HuR cleavage product-1 (HuR-CP1) associates and promotes the expression of mRNAs encoding proteins involved in apoptosis.
 
Overall design 4 samples: The GFP plasmid vectors containing full-length HuR, HuR-D226A, HuR-CP1 were expressed in oral cancer cells. GFP empty vector served as a control. HuR RNP IP was performed and RNA sequencing carried out.
 
Contributor(s) Hardiman G, Palanisamy V
Citation(s) 27941877
Submission date Mar 22, 2016
Last update date May 15, 2019
Contact name Gary Hardiman
E-mail(s) ghardimanwork@gmail.com
Phone 8437920771
Organization name MUSC
Street address 135 Cannon Street, Suite 303 MSC835
City Charleston
State/province SOUTH CAROLINA
ZIP/Postal code 29425
Country USA
 
Platforms (1)
GPL15456 Illumina HiScanSQ (Homo sapiens)
Samples (4)
GSM2095804 GFP control_131
GSM2095805 HUR FL (full-length HuR)_132
GSM2095806 HuR-D226A (asp-aln mutant)_133
Relations
BioProject PRJNA315952
SRA SRP072163

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
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Supplementary file Size Download File type/resource
GSE79477_131_vs_132_ANOVA.txt.gz 341.9 Kb (ftp)(http) TXT
GSE79477_131_vs_133_ANOVA.txt.gz 314.2 Kb (ftp)(http) TXT
GSE79477_131_vs_134_ANOVA.txt.gz 286.1 Kb (ftp)(http) TXT
GSE79477_132_vs_133_ANOVA.txt.gz 306.2 Kb (ftp)(http) TXT
GSE79477_132_vs_134_ANOVA.txt.gz 309.5 Kb (ftp)(http) TXT
GSE79477_Gene_RPKM.txt.gz 235.1 Kb (ftp)(http) TXT
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Processed data are available on Series record

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