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Series GSE79726 Query DataSets for GSE79726
Status Public on Feb 14, 2017
Title Transcriptome analysis of Synechococcus elongatus PCC 7942 for nitrogen starvation response using RNA sequencing
Organism Synechococcus elongatus PCC 7942 = FACHB-805
Experiment type Expression profiling by high throughput sequencing
Summary We reported transcriptome analysis of S. elongatus PCC 7942 for nitrogen starvation response by performing RNA-sequencing. As a result, we identified differentially express genes and confirmed physiological response changes for up or down regulation genes. among differentially expressed genes (p value < 0.01) during N starvation
 
Overall design RNA-Seq analysis of S. elongatus PCC 7942 for nitrogen starvation response
 
Contributor(s) Woo HM, Choi SY, Park B, Choi I
Citation(s) 27488818
BioProject PRJNA315938
Submission date Mar 30, 2016
Last update date May 15, 2019
Contact name Han Min Woo
E-mail(s) smsb.lab@gmail.com
Phone +82-2-958-5249
Organization name Korea Institute of Science and Technology
Department Clean Energy Research Center
Street address Hwarangno 14-gil 5, Seongbuk-gu
City Seoul
ZIP/Postal code 136-791
Country South Korea
 
Platforms (1)
GPL21672 Illumina Genome Analyzer IIx (Synechococcus elongatus PCC 7942)
Samples (6)
GSM2101632 Control 24h rep1
GSM2101633 Control 24h rep2
GSM2101634 N-minus 48h rep1
Relations
SRA SRP072154

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79726_Se7942-N-starv2016.txt.gz 32.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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