 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 27, 2016 |
| Title |
Deptor transcriptionally regulates Endoplasmic Reticulum homeostasis in Multiple Myeloma cells. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed a RNA-seq analysis by using mRNA from KMS27 cells transfected with siRNA Deptor or siRNA negative control.
|
| |
|
| Overall design |
The raw FASTQ files are available under SRA project SRP072090, bioproject PRJNA315795. There are two samples: control and silenced for Deptor, loaded in triplicate.
|
| |
|
| Contributor(s) |
Catena V, Bruno T, De Nicola F, Goeman F, Pallocca M, Iezzi S, Sorino C, Cigliana G, Floridi A, Blandino G, Fanciulli M |
| Citation(s) |
27655709 |
| BioProject |
PRJNA315795 |
| Submission date |
Apr 01, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Matteo Pallocca |
| Organization name |
Italian National Cancer Institute "Regina Elena"
|
| Street address |
Via Fermo Ognibene
|
| City |
Rome |
| ZIP/Postal code |
00144 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| SRA |
SRP072090 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE79820_all_de_cuffdiff.tsv.gz |
123.2 Kb |
(ftp)(http) |
TSV |
| GSE79820_fpkm_table_4610.tsv.gz |
430.0 Kb |
(ftp)(http) |
TSV |
SRA Run Selector |
| Processed data are available on Series record |
| Raw data are available in SRA |
|
|
|
|
 |
