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Series GSE79921 Query DataSets for GSE79921
Status Public on Oct 13, 2016
Title ATAC-Seq to investigate the spatial choreography of the accessible genome
Organism Homo sapiens
Experiment type Other
Summary Understanding the spatial choreography of the acessible genome in the intact nucleus
 
Overall design We had perfored the ATAC-seq in FACS sorted GM12878
 
Contributor(s) Chen X, Shen Y, Chang HY
Citation(s) 27749837
Submission date Apr 04, 2016
Last update date May 15, 2019
Contact name Xingqi Chen
E-mail(s) xingqi@stanford.edu
Organization name Stanford University
Lab Howard Chang's lab
Street address 269 Campus Drive
City Palo Alto
State/province CA
ZIP/Postal code 94305-5168
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM2108582 GM12878_FACS_sorted_G1_high_1
GSM2108583 GM12878_FACS_sorted_G1_high_2
GSM2108584 GM12878_FACS_sorted_G1_low_1
Relations
BioProject PRJNA317466
SRA SRP072876

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79921_RAW.tar 450.3 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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