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Series GSE80389 Query DataSets for GSE80389
Status Public on Apr 18, 2017
Title Gastric cancer targeted RNA-seq
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary targeted gene sequencong of 157 preselected genes in upper GI biopsies and resected stomack tissues
 
Overall design Total RNA was extracted from clinical specimens. Samples with RIN above 3 were included for library construction using Illumina Truseq targeted RNA expression kits.
 
Contributor(s) Li C, Hsieh Y, Tung S, Deng Y, Hsu W
Citation(s) 29720137
Submission date Apr 18, 2016
Last update date May 22, 2019
Contact name Chin Li
E-mail(s) biocl@ccu.edu.tw
Phone 0955-170-300
Organization name National Chung Cheng University
Department Life Science
Street address 168 University Road, Minhsiung
City ChiaYi
ZIP/Postal code 62102
Country Taiwan
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (110)
GSM2125704 00301
GSM2125705 00302
GSM2125706 00701
Relations
BioProject PRJNA318782
SRA SRP073447

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80389_target_157_genes_read_number.xlsx 146.6 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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