|
| Status |
Public on Apr 19, 2016 |
| Title |
Small RNA sequencing of human prostate cancer samples |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We sequenced the small RNA transcriptome of prostate cancer at different stages and generated a quantified catalogue of 3927 small non-coding RNAs (sncRNAs) detected in normal and malignant prostate tissue. From these sncRNAs less than half are microRNAs. The remaining sncRNAs represent stable sncRNAs species that originate from snoRNA, tRNA and other sncRNAs.
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| |
|
| Overall design |
Small RNA seq of different grades (Gleason score) prostate tumors
|
| |
|
| Contributor(s) |
Martens-Uzunova ES, Hoogstrate Y, Olvedy M, Visakorpi T, Jenster G |
| Citation(s) |
26041889, 27015120 |
| Submission date |
Apr 18, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Elena Martens-Uzunova |
| E-mail(s) |
e.martens@erasmusmc.nl
|
| Organization name |
Erasmus MC
|
| Department |
Urology
|
| Street address |
Wytemaweg 80
|
| City |
Rotterdam |
| ZIP/Postal code |
3000CA |
| Country |
Netherlands |
| |
|
| Platforms (1) |
| GPL9052 |
Illumina Genome Analyzer (Homo sapiens) |
|
| Samples (11)
|
|
| Relations |
| BioProject |
PRJNA318802 |
| SRA |
SRP073456 |
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