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Series GSE80406 Query DataSets for GSE80406
Status Public on Dec 21, 2016
Title Murine lung tissue: Gremlin-1 transgenic vs. wild type
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptional profiling of murine lung tissue comparing wild type to gremlin-1 transgenic untreated or silicon dioxide (silica)-treated for two months. Gremlin-1 transgene expression in lung type II epithelial cells under SPC promoter. Aim was to compare expression of fibrosis and inflammation associated genes.
 
Overall design Four condition experiment, wild type (WT), silica-treated WT, Gremlin-1 transgenic (TG) and silica-treated TG. Agilent dual color arrays with each channel analyzed independently.
 
Contributor(s) Greco D, Koli K
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Submission date Apr 18, 2016
Last update date Jul 19, 2017
Contact name Dario Greco
E-mail(s) dario.greco@tuni.fi
Organization name Tampere University
Department Faculty of Medicine and Health Technology
Lab Finnish Hub for Development and Validation of Integrated Approaches (FHAIVE)
Street address Arvo ylpön Katu 34
City Tampere
ZIP/Postal code 33520
Country Finland
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (16)
GSM2126030 Wild type lung Replicate 1
GSM2126031 Wild type lung Replicate 2
GSM2126032 Wild type lung Replicate 3
Relations
BioProject PRJNA318808

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80406_Normalized_data_with_probename.txt.gz 4.4 Mb (ftp)(http) TXT
GSE80406_RAW.tar 7.9 Mb (http)(custom) TAR
GSE80406_raw_data_files.tar.gz 48.6 Mb (ftp)(http) TAR
GSE80406_raw_file_list.txt.gz 340 b (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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