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Series GSE8428 Query DataSets for GSE8428
Status Public on Jul 11, 2007
Title The expression profiles of control embryos and pbx2-MO;pbx4-MO embryos at 10 somites and at 18 somites.
Organism Danio rerio
Experiment type Expression profiling by array
Summary Pbx homeodomain proteins have been implicated in the regulation of gene expression during muscle development. Whether Pbx proteins are required broadly for the regulation of muscle gene expression or are required for the expression of a specific subset of muscle gene expression is not known. We employed microarrays to determine the requirements for Pbx proteins during zebrafish development.
Keywords: developmental time course analysis
 
Overall design Total RNA samples from control and pbx2-MO;pbx4-MO embryos were collected at two developmental stages: 10 somites and 18 somites. Their expression profiles were analyzed using Affymetrix zebrafish genome arrays, and the differentially hybridized genes were determined to be significant according to a FDR<0.05.
 
Contributor(s) Maves L, Waskiewicz AJ, Paul B, Cao Y, Tyler A, Moens CB, Tapscott SJ
Citation(s) 17699609
Submission date Jul 10, 2007
Last update date Jan 25, 2018
Contact name Yi Cao
E-mail(s) ycao@fhcrc.org
Phone 206-667-5278
Organization name Fred Hutchinson CRC
Department Human Biology
Lab Tapscott
Street address 1100 Fairview Ave. N
City Seatttle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL1319 [Zebrafish] Affymetrix Zebrafish Genome Array
Samples (12)
GSM209537 Control MO, 10s, rep1
GSM209538 Control MO, 10s, rep2
GSM209539 Control MO, 10s, rep3
Relations
BioProject PRJNA101487

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE8428_RAW.tar 26.5 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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