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Series GSE84480 Query DataSets for GSE84480
Status Public on Mar 16, 2017
Title PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Expression data of ES cells with or without Pcgf6, Ring1A/B, Max and Mga.
Expression data of ES cells with or without Cbx1/3.
 
Overall design Mouse embryonic stem cells deficient for Pcgf6 and associating genes were evaluated using RNA-seq.
Mouse embryonic stem cells deficient for Cbx1/3 and associating genes were evaluated using RNA-seq.
 
Contributor(s) Endoh M, Koseki H, Sharif J, Endo TA
Citation(s) 28304275
Submission date Jul 16, 2016
Last update date May 15, 2019
Contact name Takaho A. Endo
E-mail(s) takaho.endo@riken.jp
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (27)
GSM2237784 Pcgf6 fl/fl ESC (OHT-)_S01448
GSM2237785 Pcgf6 fl/fl ESC (OHT+ day4)_S01449
GSM2237786 Pcgf6 fl/fl ESC (OHT+ day8)_S01450
This SubSeries is part of SuperSeries:
GSE87485 PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes
Relations
BioProject PRJNA329408
SRA SRP078684

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84480_fpkm_CbxSamples.txt.gz 218.6 Kb (ftp)(http) TXT
GSE84480_fpkmdata.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
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