|
| Status |
Public on Jul 18, 2007 |
| Title |
Transcriptional profiling of Candida albicans wild-type CAI-4 strans treated by Hst5 |
| Platform organism |
Candida albicans SC5314 |
| Sample organism |
Candida albicans |
| Experiment type |
Expression profiling by array
|
| Summary |
The experiment was designed to study the transcriptional profiling of Candida albicans wild-type CAI-4 strains and corresponding Histatin 5 treated strains. Since Histatin 5 will kill Candida albicans, the focus will be on how many and which genes are significantly affected with the treatment of Histatin 5. Currently, we only conducted the microarray experiments at one concentration of Histatin 5 and one time point of treatment.
Keywords: cell type comparison
|
| |
|
| Overall design |
Direct balanced design (without reference sample)
Four samples/arrays were used in the experiment, which includes 2 dye swap replicates and 2 duplicate experiments. The details are
CAI-4-Cy5 <-> Hst5_CAI-4-Cy3
CAI-4-Cy5 <-> Hst5_CAI-4-Cy3
CAI-4-Cy3 <-> Hst5_CAI-4-Cy5
CAI-4-Cy3 <-> Hst5_CAI-4-Cy5
CAI-4 is wild-type strain
Hst5_CAI-4 is CAI-4 treated with Histatin 5 for 1hr. under specific conditions.
|
| |
|
| Contributor(s) |
Vylkova S, Li W |
| Citation(s) |
17715369 |
| Submission date |
Jul 13, 2007 |
| Last update date |
Aug 30, 2012 |
| Contact name |
Wansheng Li |
| Organization name |
University at Buffalo
|
| Department |
Oral Biology
|
| Lab |
Dr.Edgerton's lab
|
| Street address |
3435 main st.
|
| City |
Buffalo |
| State/province |
NY |
| ZIP/Postal code |
14215 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL4920 |
Edgerton Lab Candida albicans SC5314 6k array_ORF6 |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA101557 |
Less...
More...