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Series GSE86288 Query DataSets for GSE86288
Status Public on Sep 01, 2016
Title MIST1 and PTF1 Collaborate in Feed-forward Regulatory Loops that Maintain the Pancreatic Acinar Phenotype in Adult Mice [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary MIST1 and PTF1 Collaborate in Feed-forward Regulatory Loops that Maintain the Pancreatic Acinar Phenotype in Adult Mice
 
Overall design RNA-seq was done on 2 normal heterozygous Mist1(+/ko) mice and 3 Mist1(ko/ko) mice.
 
Contributor(s) Jiang M, MacDonald R, Hoang C, Deering T, Azevedo-Pouly A, Swift G
Citation(s) 27644326, 27644325, 37796967
BioProject PRJNA276675
Submission date Aug 31, 2016
Last update date Oct 18, 2023
Contact name Galvin Swift
E-mail(s) galvin.swift@utsouthwestern.edu
Organization name U TX Southwestern Medical Center
Department Molecular Biology
Lab Ray MacDonald
Street address 6000 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390-9148
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (5)
GSM2299649 Mist1 het control 1
GSM2299650 Mist1 het control 2
GSM2299651 Mist1 knockout 1
This SubSeries is part of SuperSeries:
GSE86290 MIST1 and PTF1 Collaborate in Feed-forward Regulatory Loops that Maintain the Pancreatic Acinar Phenotype in Adult Mice
Relations
SRA SRP055674

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86288_Mist1-HTseqResults.xlsx 978.3 Kb (ftp)(http) XLSX
GSE86288_Mist1KO_edgeR.txt.gz 201.9 Kb (ftp)(http) TXT
GSE86288_Mist1KO_edgeR_DE.txt.gz 26.4 Kb (ftp)(http) TXT
GSE86288_RAW.tar 460.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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