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Series GSE86911 Query DataSets for GSE86911
Status Public on Aug 11, 2017
Title ChIP-Seq based analysis of THAP1 binding in mouse ES cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome binding/occupancy by wild type THAP1 was profiled by high throughput sequencing in wild type mouse ES cells derived from C57Bl/6 blastocysts
 
Overall design ChIP Seq was performed by standard methods using a commercial antibody (ProteinTech) in untreated cells in the pluripotent state
 
Contributor(s) Ehrlich ME
Citation(s) 28579396, 29364887
Submission date Sep 14, 2016
Last update date Jun 11, 2019
Contact name Chengguo Wei
Organization name Icahn School of Medicine at Mount Sinai
Department Medicine
Street address 1428 Madison Ave1468 Madison Ave
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (2)
GSM2310258 THAP1_sample1
GSM2310259 THAP1_sample2
Relations
BioProject PRJNA342945
SRA SRP089861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86911_RAW.tar 458.2 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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