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Series GSE88898 Query DataSets for GSE88898
Status Public on Oct 31, 2018
Title Transcript profiling in peritoneal macrophages from wildtype or c-JunΔLysM mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary The polarization and activation of macrophages are controlled synergistically by transcription factors such as NF-κB and AP-1 transcription factor members. Surprisingly, little is known about the role of the AP-1 transcription factor c-Jun in macrophage activity. To determine the full profile of c-Jun network, microarray RNA expression analysis using Agilent Technologies platform was performed in wild-type and c-JunΔLysM macrophages.
 
Overall design For microarray analyses, peritoneal macrophages were collected by peritoneal lavage of 8 week old wild-type (n=3) or c-JunΔLysM mice (n=2). Peritoneal cells were plated over night. The next day, suspension cells were removed and only adherent cells were used for RNA isolation.
 
Contributor(s) Hannemann N, Reid S, Sonnewald S, Bozec A
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Submission date Oct 18, 2016
Last update date Nov 01, 2018
Contact name Aline Bozec
Organization name Universitätsklinikum Erlangen, Department of Internal Medicine 3 – Rheumatology and Immunology
Lab Aline Bozec
Street address Ulmenweg 18
City Erlangen
ZIP/Postal code 91054
Country Germany
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (5)
GSM2354057 wild-type 5
GSM2354058 wild-type 11
GSM2354060 wild-type 14
Relations
BioProject PRJNA349038

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE88898_75_percentile_normalized.txt.gz 77.9 Kb (ftp)(http) TXT
GSE88898_RAW.tar 16.2 Mb (http)(custom) TAR (of TXT)
Processed data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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