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Series GSE88986 Query DataSets for GSE88986
Status Public on Aug 11, 2017
Title cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal is to profile cFos binding sites in an p53 knockout mouse bone marrow-derived stem cells (mBMSCs).
 
Overall design Fifty million of p53 knockout (p53KO) mBMSCs expressing cFos were fixed and subjected to ChIP-seq assay using 10 ug anti-cFos antibody (Santa Cruz, Cat:sc-253).
 
Contributor(s) Huang J
Citation(s) 28552607
Submission date Oct 20, 2016
Last update date May 15, 2019
Contact name Jing Huang
E-mail(s) huangj3@mail.nih.gov
Organization name National Cancer Institute
Lab Cancer Biology and Genetics
Street address 37 Convent Dr. 37/3140
City Bethesda
State/province MD
ZIP/Postal code MD 20892
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM2356778 Input
GSM2356779 cFos ChIP
This SubSeries is part of SuperSeries:
GSE89015 cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma
Relations
BioProject PRJNA349461
SRA SRP091862

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE88986_RAW.tar 170.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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