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Series GSE89029 Query DataSets for GSE89029
Status Public on Feb 14, 2018
Title H3K79me2 ChIP-seq profiling in melanoma
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To study the effect of DOT1L loss-of-function mutations in melanoma
 
Overall design ChIP-seq of H3K79me2 in melanoma cells with and without shRNA-mediated DOT1L knockdown, as well as melanoma cells harboring DOT1L loss-of-function mutatioins.
 
Contributor(s) Zhang X
Citation(s) 29343685
Submission date Oct 21, 2016
Last update date May 15, 2019
Contact name Xiaoyang Zhang
Organization name University of Utah
Lab Zhang lab
Street address 1950 CIrcle of Hope
City Salt Lake City
ZIP/Postal code 84112
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (6)
GSM2357663 c21-A-K79me2
GSM2357664 c21-B-K79me2
GSM2357665 c21-shDOT1L-A-K79me2
Relations
BioProject PRJNA349975
SRA SRP091916

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89029_RAW.tar 192.8 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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