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Series GSE89311 Query DataSets for GSE89311
Status Public on Aug 15, 2017
Title Inhibition of GGPPS1 attenuated LPS-induced acute lung injury by suppressing the NLRP3 inflammasome
Organism Mus musculus
Experiment type Expression profiling by array
Summary Rationale: Geranylgeranyl pyrophosphate synthase large subunit 1 (GGPPS1), a catalase downstream of the mevalonate pathway, regulates various pathological processes through balancing the production of farnesyl pyrophosphate and geranylgeranyl pyrophosphate. We sought to investigate whether GGPPS1 plays a role in mediating acute lung injury (ALI) using a mouse model of inflammation.
Methods: Lipopolysaccharide (LPS) was intra-tracheally instilled to induce ALI in lung specific GGPPS1 knockout and wild-type mice. Expression of GGPPS1 in lung tissues and alveolar epithelial cells (AECs) was examined at different time points. Alveolar exudate, neutrophil infiltration, lung injury and cell death were determined. Change in global gene expression in response to GGPPS1 depletion was measured using mRNA microarray and verified in vivo and in vitro.
Results: GGPPS1 levels increased significantly in lung tissues from LPS-induced ALI mice, where it showed a time- and dose-dependent increase in alveolar epithelial cells. Specific deletion of pulmonary GGPPS1 reduced the alveolar exudate and attenuated the severity of lung injury through inhibiting apoptosis of AECs. However, GGPPS1 deletion had limited effect on neutrophil counts and TNF-α levels in alveolar fluids. Deletion of GGPPS1 inhibited LPS-induced inflammasome activation, in terms of IL-1β release and pyroptosis, by down-regulating NLRP3 expression.
Conclusions: Inhibition of pulmonary GGPPS1 attenuated LPS-induced ALI, predominantly by suppressing NLRP3 inflammasome activation.
 
Overall design A total of 8 samples from mice treated with LPS in lung specific GGPPS1 knockout and wild-type mice (n=4 for each group)
 
Contributor(s) Xu W, Song Y
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Submission date Oct 30, 2016
Last update date Feb 02, 2018
Contact name wujian xu
E-mail(s) wujian_xu@163.com
Organization name Jinling Hospital
Department The department of respiratory disease
Street address 305 Esat Zhongshan Road
City Nanjing
State/province Jiangshu
ZIP/Postal code 210000
Country China
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM2365866 lung tissues_CTL1
GSM2365867 lung tissues_CTL2
GSM2365868 lung tissues_CTL3
Relations
BioProject PRJNA351748

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89311_RAW.tar 95.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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