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Series GSE8943 Query DataSets for GSE8943
Status Public on May 01, 2008
Title Satin mice stomach antrum
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcription factor Foxq1 controls mucin gene expression and granule content in mouse stomach surface mucous cells

Background and Aims: The gastric mucosa provides a stringent epithelial barrier and produces acid and enzymes that initiate digestion. In this regenerating tissue, progenitors differentiate continually into 4 principal specialized cell types, yet underlying mechanisms of differentiation are poorly understood. We identified stomach-restricted expression of the forkhead transcription factor FOXQ1.
Methods: We used a combination of genetic, histochemical, ultrastructural and molecular analysis to study gastric cell lineages with respect to FOXQ1.
Results: Within the developing and adult gastrointestinal tract, Foxq1 mRNA is restricted to the stomach, expressed prominently in foveolar (pit) cells, the abundant mucin-producing cells that line the mucosal surface, and required for their complete differentiation. Mice carrying Foxq1 coding mutations show virtual absence of mRNA and protein for the backbone of the predominant stomach mucin, MUC5AC. These observations correspond to a paucity of foveolar-cell secretory vesicles and notable loss of stomach but not intestinal mucus. Transcriptional profiling identified a surprisingly restricted set of genes with altered expression in Foxq1 mutant stomachs. MUC5AC is a highly tissue-restricted product that similarly depends on FOXQ1 in its other major site of expression, conjunctival goblet cells.
Conclusions: Taken together, these observations imply that promotion of gastric MUC5AC synthesis is a primary, cell-autonomous function of FOXQ1. This study is the first to implicate a transcription factor in terminal differentiation of foveolar cells and begins to define the requirements to assemble highly specialized organelles and cells in the gastric mucosa.
Keywords: mutant mouse stomach
 
Overall design RNA from stomach antrum from 2 of each Satin, Beige, and BL6 mice were compared using microarray analysis.
 
Contributor(s) Verzi Mp, Khan Ah, Ito S, Shivdasani Ra
Citation(s) 18558092
Submission date Sep 04, 2007
Last update date May 04, 2018
Contact name Ramesh A Shivdasani
E-mail(s) ramesh_shivdasani@dfci.harvard.edu
Phone 617 632-5746
Fax 617 632-5417
URL http://research.dfci.harvard.edu/shivdasani
Organization name Dana-Farber Cancer Institute
Department Medical Oncology
Lab Shivdasani
Street address 44 Binney St.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
Samples (6)
GSM226760 C57/BL6 control stomach antrum RNA replicate 1
GSM226761 C57/BL6 control stomach antrum RNA replicate 2
GSM226762 Beige control stomach antrum RNA replicate 1
Relations
BioProject PRJNA102367

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE8943_RAW.tar 12.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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