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Series GSE89440 Query DataSets for GSE89440
Status Public on Aug 28, 2018
Title Interferon stimulation creates chromatin marks to establish transcriptional memory
Organism Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30201712
Submission date Nov 02, 2016
Last update date May 17, 2019
Contact name Rui Kamada
E-mail(s) kamadar@sci.hokudai.ac.jp
Phone +81-11-706-2721
Organization name Hokkaido University
Department Department of Chemistry, Faculty of Science
Lab Laboratory of Biological Science
Street address N10 W8, Kita-ku
City Sapporo
ZIP/Postal code 060-0810
Country Japan
 
Platforms (2)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (60)
GSM2358619 Naïve-0h [EA12035_255968_MOGENE-1_0-ST-V1_1.0HNAIVE]
GSM2358620 Naïve-0h [EA12035_255972_MOGENE-1_0-ST-V1_5.0HNAIVE]
GSM2358621 Naïve-0h [EA12035_260026_MOGENE-1_0-ST-V1_1.0HNAIVE]
This SuperSeries is composed of the following SubSeries:
GSE89092 Microarray analysis of interferon stimulated bone-marrow derived macrophages Transcriptomes
GSE89349 Next Generation Sequencing Facilitates Quantitative Analysis of interferon stimulated MEFs Transcriptomes [RNA-Seq]
GSE89351 Genome-wide maps of chromatin state in interferon stimulated cells
Relations
BioProject PRJNA352210

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89440_RAW.tar 115.8 Mb (http)(custom) TAR (of CEL, CHP, WIG)
SRA Run SelectorHelp

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