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Series GSE89496 Query DataSets for GSE89496
Status Public on Mar 30, 2017
Title RNA-seq of Drosophila 0-2 hr embryos Rnase R
Organism Drosophila melanogaster
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We report the identification of Rnase R resistent stable intronic sequence RNAs (sisRNAs) in Drosophila.
 
Overall design RNA was obtained from 0-2 hr embryos and subjected to deep sequencing.
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Authors state "We screened by manual inspection on the genome browser after mapping the reads to the genome" and "We managed to obtain 6 candidates with this approach".
 
Contributor(s) Pek JW
Citation(s) 28343963
Submission date Nov 03, 2016
Last update date May 15, 2019
Contact name Jun Wei Pek
E-mail(s) junwei@tll.org.sg
Phone +6568727818
Organization name Temasek Life Sciences Laboratory
Street address 1 Research Link National University of Singapore
City Singapore
ZIP/Postal code 117604
Country Singapore
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (1)
GSM2373908 0-2 hr embryo Rnase R
Relations
BioProject PRJNA352382
SRA SRP092538

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89496_RAW.tar 20.0 Kb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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