|
| Status |
Public on Jul 10, 2017 |
| Title |
RNA-Seq Analysis of the Transcriptomes of Tomato+ and Tomato- HNSCC cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The role of this study is to compare the global gene expression profiles between Bmi1+ Cancer stem cells and Bmi1- cancer cells
|
| |
|
| Overall design |
Oral cancer from Bmi1CreER;tdTomato mouse treated with 4NQO for 26 weeks were havested 24 hr after tamoxifen injection. Tumor tissues were dissociated into single cell suspension and FACS-sorted based on the tomato expression. mRNA were isolated from sorted cells and RNAseq were performed.
|
| |
|
| Citation(s) |
28285905 |
| Submission date |
Nov 04, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Cunyu Wang |
| E-mail(s) |
cwang@dentistry.ucla.edu
|
| Phone |
3108256317
|
| Organization name |
UCLA
|
| Department |
School of Dentistry
|
| Lab |
CHS 56-200
|
| Street address |
10833 Le Conte Ave
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA352529 |
| SRA |
SRP092608 |
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