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Series GSE8988 Query DataSets for GSE8988
Status Public on Sep 11, 2007
Title Cicardian regulation in rat liver
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary In intact animals, time of drug administration may be an important factor influencing drug response. Our general goal seeks to incorporate circadian time into the study of corticosteroid regulated gene expression. Since levels of endogenous steroid exhibit circadian fluctuations, it is our hypothesis that the expression of genes controlled by corticosteroids either directly or indirectly, will also exhibit a circadian pattern in normal animals.
Keywords: time series design
 
Overall design This study is designed to examine fluctuations in gene expression in liver within the 24 hour circadian cycle in normal animals. Fifty-four male normal Wistar rats (250-350 g body weight) were housed in a strictly controlled stress free environment with light:dark cycles of 12 hr:12hr. Three animals were sacrificed at each of 18 selected time points within the 24 hour cycle. RNA was prepared from livers for gene arrays. Time point designations reflect time after lights on in hours.
 
Contributor(s) Almon R
Citation(s) 18562560, 20500897, 21040584
Submission date Sep 07, 2007
Last update date Nov 08, 2019
Contact name Eric P Hoffman
E-mail(s) ericphoffman@gmail.com
Organization name Binghamton University - SUNY
Department Pharmaceutical Sciences
Street address PO Box 6000
City Binghamton
State/province NY
ZIP/Postal code 13902
Country USA
 
Platforms (1)
GPL341 [RAE230A] Affymetrix Rat Expression 230A Array
Samples (54)
GSM227353 Richard Almon-1-1138200269274
GSM227354 Richard Almon-7-1138200269586
GSM227355 Richard Almon-34-1138200270492
Relations
BioProject PRJNA102455

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE8988_RAW.tar 88.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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