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Series GSE9241 Query DataSets for GSE9241
Status Public on Oct 06, 2007
Title Disruption of E-cadherin-mediated adhesion induces a functionally distinct pathway of dendritic cell maturation
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The maturation of dendritic cells (DCs) after exposure to microbial products or inflammatory mediators plays a critical role in initiating the immune response. We found that maturation can also occur under steady state conditions, triggered by alterations in E-cadherin-mediated DC-DC adhesion. Selective disruption of these interactions induced the typical features of DC maturation including the upregulation of costimulatory molecules, MHC class II, and chemokine receptors. These events were triggered at least in part by activation of the b-catenin pathway. However, unlike maturation induced by microbial products, E-cadherin-stimulated DCs failed to release immunostimulatory cytokines, exhibiting an entirely different transcriptional profile. As a result, E-cadherin-stimulated DCs elicited an entirely different T cell response in vivo, generating T cells with a regulatory as opposed to an effector phenotype. These DCs induced tolerance in vivo and may thus contribute to the elusive steady state “tolerogenic DCs”.
Keywords: time-course, dendritic cell maturation
 
Overall design We performed a genome-wide microarray analysis to study the expression profiles of DCs matured by CD as opposed to a conventional TLR agonist (E. coli, which stimulates multiple TLRs). RNA was isolated from human CD34+ DCs at various times after stimulation and used to probe Affymetrix U95Av2 chips. A time course was followed after various stimuli, with single chips used per time point. >700 genes were found differentially regulated upon maturation by either CD or bacterial stimulation. Cluster analysis revealed that after an early phase (1-3 hr) of similarity, expression profiles exhibited by the two sets of DCs diverged dramatically at later time points (>6 hr). A number of transcripts were markedly upregulated in the bacteria-stimulated set that remained relatively unchanged or actually decreased in the cluster-disrupted set. There were some transcripts upregulated in cluster-disrupted cells, however, with at least some of these increases prevented by adding anti-E-cadherin mAb under conditions that blocked maturation. Clearly, the transcriptional events induced by alteration of E-cadherin-mediated adhesion were quite distinct from those induced by TLR activation.
 
Contributor(s) Whitney A, Jiang A, Jiang S, Ono S, Mellman I
Citation(s) 17936032
Submission date Oct 04, 2007
Last update date Dec 13, 2018
Contact name James Andrew Whitney
E-mail(s) awhitney@cgipharma.com
Organization name CGI Pharmaceuticals Inc.
Street address 36 East Industrial Road
City Branford
State/province CT
ZIP/Postal code 06405
Country USA
 
Platforms (1)
GPL8300 [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array
Samples (17)
GSM234706 DC_1_CT0hr
GSM234708 DC_2_CT36hr
GSM234710 DC_3_CD1hr
Relations
BioProject PRJNA102851

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE9241_RAW.tar 130.3 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table

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