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GEO accession:
Series GSE93730
Query DataSets for GSE93730
Status
Public on Jan 01, 2018
Title
Extensive Functional Redundancy of Mammalian Enhancers
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29420474
Submission date
Jan 17, 2017
Last update date
May 15, 2019
Contact name
Diane Dickel
Organization name
Lawrence Berkeley National Laboratory
Lab
mammalian functional genomics laboratory
Street address
1 Cyclotron Road
City
Berkeley
State/province
CA
ZIP/Postal code
94720
Country
USA
Platforms (2)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (52)
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More...
GSM2461129
hs1586KO_replicate_01_ChIP_H3K27ac
GSM2461130
hs1262KO_replicate_01_ChIP_H3K27ac
GSM2461131
hs1467KO_replicate_01_ChIP_H3K27ac
GSM2461132
hs1603KO_replicate_01_ChIP_H3K27ac
GSM2461133
hs1586KO_replicate_01_input
GSM2461134
hs1262KO_replicate_01_input
GSM2461135
hs1467KO_replicate_01_input
GSM2461136
hs1603KO_replicate_01_input
GSM2461137
hs1586KO_replicate_02_ChIP_H3K27ac
GSM2461138
hs1262KO_replicate_02_ChIP_H3K27ac
GSM2461139
hs1467KO_replicate_02_ChIP_H3K27ac
GSM2461140
hs1603KO_replicate_02_ChIP_H3K27ac
GSM2461141
hs1586KO_replicate_02_input
GSM2461142
hs1262KO_replicate_02_input
GSM2461143
hs1467KO_replicate_02_input
GSM2461144
hs1603KO_replicate_02_input
GSM2461145
Wt_replicate_01_ChIP_H3K27ac
GSM2461146
Wt_replicate_02_ChIP_H3K27ac
GSM2461147
mm1179KO_replicate_01_ChIP_H3K27ac
GSM2461148
mm1179KO_replicate_02_ChIP_H3K27ac
GSM2461149
Wt_replicate_01_input
GSM2461150
Wt_replicate_02_input
GSM2461151
mm1179KO_replicate_01_input
GSM2461152
mm1179KO_replicate_02_input
GSM2461153
Wt_replicate_03_ChIP_H3K27ac
GSM2461154
Wt_replicate_04_ChIP_H3K27ac
GSM2461155
hs72KO_replicate_01_ChIP_H3K27ac
GSM2461156
hs72KO_replicate_02_ChIP_H3K27ac
GSM2461157
mm1179KO_replicate_03_ChIP_H3K27ac
GSM2461158
mm1179KO_replicate_04_ChIP_H3K27ac
GSM2461159
Wt_replicate_03_input
GSM2461160
Wt_replicate_04_input
GSM2461161
hs72KO_replicate_01_input
GSM2461162
hs72KO_replicate_02_input
GSM2461163
mm1179KO_replicate_03_input
GSM2461164
mm1179KO_replicate_04_input
GSM2461165
Wt_replicate_01_RNA-seq
GSM2461166
Wt_replicate_02_RNA-seq
GSM2461167
mm1179KO_replicate_01_RNA-seq
GSM2461168
mm1179KO_replicate_02_RNA-seq
GSM2461169
hs1586KO_replicate_01_RNA-seq
GSM2461170
hs1586KO_replicate_02_RNA-seq
GSM2461171
mm1179_hs1586_DKO_replicate_01_RNA-seq
GSM2461172
mm1179_hs1586_DKO_replicate_02_RNA-seq
GSM2461173
Wt_replicate_03_RNA-seq
GSM2461174
Wt_replicate_04_RNA-seq
GSM2461175
mm1179KO_replicate_03_RNA-seq
GSM2461176
mm1179KO_replicate_04_RNA-seq
GSM2461177
hs1586KO_replicate_03_RNA-seq
GSM2461178
hs1586KO_replicate_04_RNA-seq
GSM2461179
mm1179_hs1586_DKO_replicate_03_RNA-seq
GSM2461180
mm1179_hs1586_DKO_replicate_04_RNA-seq
This SuperSeries is composed of the following SubSeries:
GSE93728
Extensive Functional Redundancy of Mammalian Enhancers [ChIP-seq]
GSE93729
Extensive Functional Redundancy of Mammalian Enhancers [RNA-seq]
Relations
BioProject
PRJNA362215
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE93730_RAW.tar
22.9 Mb
(http)
(custom)
TAR (of BED, FPKM_TRACKING)
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