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Series GSE93766 Query DataSets for GSE93766
Status Public on Jun 23, 2021
Title Transcriptome comparison of balding and non-balding dermal papilla aggregates from NHEK co-culturing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Androgenetic alopecia (AGA, male patterned baldness) is a prevalent hair loss condition in males that develops due to the influence of androgens and genetic predisposition. The keratinocytes-surrounded spheroid dermal papilla (DP) at the base of the hair follicle is essential in hair morphogenesis and cycling. With the aim of elucidating genes involved in AGA pathogenesis, we co-cultured immortalised balding and non-balding human DP cells (DPC) derived from male AGA patients with epidermal keratinocyte (NHEK) using multi-interfacial polyelectrolyte complexation (MIPC) technique, and compared gene expression using RNA-seq between isolated balding and non-balding DP aggregates.
 
Overall design Examination of transcriptome difference between isolated balding and non-balding dermal papilla cell aggregates, technical triplicate.
 
Contributor(s) Hillmer AM
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Submission date Jan 18, 2017
Last update date Jun 23, 2021
Contact name Axel HILLMER
E-mail(s) ahillmer@uni-koeln.de
Organization name University of Cologne
Department Institute of Pathology
Street address Kerpener Str. 62
City Cologne
ZIP/Postal code 50937
Country Germany
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (18)
GSM2461765 BK0_repA
GSM2461766 BK0_repB
GSM2461767 BK0_repC
Relations
BioProject PRJNA362329
SRA SRP096965

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93766_BK0vsNBK0_gene_exp.diff.txt.gz 9.5 Mb (ftp)(http) TXT
GSE93766_BK0vsNBK0_isoform_exp.diff.txt.gz 22.0 Mb (ftp)(http) TXT
GSE93766_BK24vsNBK24_gene_exp.diff.txt.gz 9.7 Mb (ftp)(http) TXT
GSE93766_BK24vsNBK24_isoform_exp.diff.txt.gz 22.2 Mb (ftp)(http) TXT
GSE93766_BK6vsNBK6_gene_exp.diff.txt.gz 9.6 Mb (ftp)(http) TXT
GSE93766_BK6vsNBK6_isoform_exp.diff.txt.gz 22.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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