|
| Status |
Public on Apr 12, 2017 |
| Title |
GRHL3 binding and the enhancer landscape are reorganized during transitions between different functional states of epidermal keratinocytes |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
28445475 |
| Submission date |
Feb 03, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Bogi Andersen |
| Organization name |
University of California, Irvine
|
| Department |
Medicine
|
| Lab |
Andersen
|
| Street address |
839 Health Sciences Dr.
|
| City |
Irvine |
| State/province |
CA |
| ZIP/Postal code |
92697 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (16)
|
| GSM2476163 |
siGRHL3 replicate 1, 12 hours migration, NHEK [siGRHL3-migration] |
| GSM2476164 |
siGRHL3 replicate 2, 12 hours migration, NHEK [siGRHL3-migration] |
| GSM2476165 |
scramble control replicate 1, 12 hours migration, NHEK [siGRHL3-migration] |
| GSM2476166 |
scramble control replicate 2, 12 hours migration, NHEK [siGRHL3-migration] |
| GSM2476167 |
scramble control replicate 1, 0 hours migration, NHEK [siGRHL3-migration] |
| GSM2476168 |
scramble control replicate 2, 0 hours migration, NHEK [siGRHL3-migration] |
| GSM2476169 |
scramble control replicate 1 NHEK [siREST-proliferation] |
| GSM2476170 |
scramble control replicate 2 NHEK [siREST-proliferation] |
| GSM2476171 |
siREST replicate 1 NHEK [siREST-proliferation] |
| GSM2476172 |
siREST replicate 2 NHEK [siREST-proliferation] |
| GSM2476173 |
scramble control replicate 1 NHEK [siREST-migration] |
| GSM2476174 |
scramble control replicate 2 NHEK [siREST-migration] |
| GSM2476175 |
siREST replicate 1 NHEK [siREST-migration] |
| GSM2476176 |
siREST replicate 2 NHEK [siREST-migration] |
| GSM2498560 |
NHEKM-GRHL3-rep1 |
| GSM2498561 |
NHEKM-GRHL3-rep2 |
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE94465 |
GRHL3 binding and the enhancer landscape are reorganized during transitions between different functional states of epidermal keratinocytes [siGRHL3-migration] |
| GSE94466 |
GRHL3 binding and the enhancer landscape are reorganized during transitions between different functional states of epidermal keratinocytes [siREST-proliferation] |
| GSE94467 |
GRHL3 binding and the enhancer landscape are reorganized during transitions between different functional states of epidermal keratinocytes [siREST-migration] |
| GSE95199 |
GRHL3 binding and the enhancer landscape are reorganized during transitions between different functional states of epidermal keratinocytes [ChIP-seq] |
|
| Relations |
| BioProject |
PRJNA369789 |
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