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Series GSE94987 Query DataSets for GSE94987
Status Public on Feb 14, 2018
Title Methylation profiling of preclinical ETMR models
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Methylation profiles of preclinical ETMR models were generated and compared to reference primary human tumors to determine the molecular fidelity of the preclinical model systems.
 
Overall design 2 preclinical ETMR models (BT183: tumor, cell line, labeled cell line, orthotopic xenograft; NCH3602: tumor, orthotopic PDX) were profiled using either the Infinium HumanMethylation450 BeadChip (450k) array or the Infinium MethylationEPIC BeadChip (EPIC) array.
 
Contributor(s) Kool M
Citation(s) 28482026
Submission date Feb 16, 2017
Last update date Mar 22, 2019
Contact name Marcel Kool
E-mail(s) m.kool@dkfz.de
Organization name German Cancer Research Center DKFZ
Department Pediatric Neurooncology
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platforms (2)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL21145 Infinium MethylationEPIC
Samples (6)
GSM2493810 dkfz_BT183_tumor
GSM2493811 dkfz_NCH3602_tumor
GSM2493812 dkfz_NCH3602_PDX
Relations
BioProject PRJNA375092

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94987_RAW.tar 411.9 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table

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