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Series GSE9520 Query DataSets for GSE9520
Status Public on Nov 07, 2007
Title Transcriptome changes in hMSCs during expansion
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Human mesenchymal stem cells or multipotent stromal cells (MSCs) are of interest for clinical therapy, in part because of their capacity for proliferation and differentiation. However, results from clinical trials and in vitro models have been variable, possibly due to MSC heterogeneity and a lack of standardization between MSC in vitro expansion protocols. Here we defined changes in MSCs during expansion in vitro. In low density cultures, MSCs expand through distinct lag, exponential growth and stationary phases. We assayed cultures of passage 2 human MSCs from three donors at low density (50 cells/cm2) at about 5% confluence on Day 2 and after the cultures had expanded to about 70% confluence on Day 7. On Day 2 genes involved in cell division were up-regulated. On Day 7 genes for cell development were up-regulated. The variations between three donors were less than the variation within the expansion of MSCs from a single donor. The microarray data for selected genes were confirmed by real-time PCR, ELISA and FACScan. About 50% of cells at Day 2 were in S-phase compared to 10% at Day 7. The results demonstrated major differences in early and late stage cultures of MSCs that should be considered in using the cells in experiments and clinical applications.
Keywords: Time course
 
Overall design We assayed cultures of passage 2 human MSCs from three donors at low density (50 cells/cm2) at about 5% confluence on Day 2 and after the cultures had expanded to about 70% confluence on Day 7.
 
Contributor(s) Larson BL, Ylostalo J, Prockop DJ
Citation(s) 17916801
Submission date Nov 05, 2007
Last update date Mar 25, 2019
Contact name Joni Ylostalo
E-mail(s) ylostalo@medicine.tamhsc.edu
Organization name Texas A&M
Department Institute for Regenerative Medicine
Street address 5701 Airport Rd., Module C
City Temple
State/province TX
ZIP/Postal code 76502
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (6)
GSM241198 hMSC_Donor220R_Passage2_Day2
GSM241199 hMSC_Donor220R_Passage2_Day7
GSM241200 hMSC_Donor240L_Passage2_Day2
Relations
BioProject PRJNA103323

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SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GSE9520_RAW.tar 88.0 Mb (http)(custom) TAR (of CEL, CHP)
Processed data provided as supplementary file
Processed data included within Sample table

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