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Status |
Public on May 31, 2017 |
Title |
Identification of super-enhancers in colorectal cancer cell lines |
Organism |
Homo sapiens |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
H3K27 acetylation statuses were analyzed in four colon cancer cell lines (RKO, Caco2, SW48, and SW620), and colorectal cancer-specific super-enhancers were identified.
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Overall design |
H3K27 acetylation statuses in four colon cancer cell lines were analyzed using Illumina HiSeq4000.
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Contributor(s) |
Nakamura Y, Hattori N, Iida N, Ushijima T |
Citation(s) |
28576751 |
Submission date |
Mar 10, 2017 |
Last update date |
May 15, 2019 |
Contact name |
Naoko Iida |
E-mail(s) |
niida@ncc.go.jp
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Organization name |
National Cancer Center in Japan.
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Lab |
Division of Epigenomics
|
Street address |
5-1-1 Tsukiji
|
City |
Chuo-ku |
State/province |
Tokyo |
ZIP/Postal code |
104-0045 |
Country |
Japan |
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Platforms (1) |
GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
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Samples (8)
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Relations |
BioProject |
PRJNA378753 |
SRA |
SRP101712 |