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Series GSE97162 Query DataSets for GSE97162
Status Public on Jul 01, 2017
Title Trans-Generational Hormesis and the Inheritance of Aging Resistance [ChIP-seq]
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Animals respond to dietary changes by adapting their metabolism to available nutrients through insulin and insulin-like growth factor signalling. Restricting calorie intake generally extends life and health span, but Drosophila fed non-ideal sugars such as galactose are stressed and have shorter life spans. Here, we report that although these flies have shorter life spans, their offspring show significant life extension if switched to a normal sugar (glucose) diet. We define this as TGH or trans-generational hormesis, a beneficial effect that comes from a mild stress. We trace the effects to changes in stress responses in parents, ROS production, effects on lipid metabolism, and changes in chromatin and gene expression. We find that this mechanism is similar to what happens to the long lived Indy mutants on normal food, but surprisingly find that Indy is required for life span extension for galactose fed flies. Indy mutant flies grown on galactose do not live longer as do their siblings grown on glucose, rather overexpression of Indy rescues lifespan for galactose reared flies. We define a process where sugar metabolism can generate epigenetic changes that are inherited by offspring, providing a mechanism for how transgenerational nutrient sensitivities are passed on.
 
Overall design Analyses of two differen sugar substrate fed dorosopila fly transcriptome with two replicates for each condition
 
Contributor(s) Fang NL, Suresh J, Chaithanya K, Linfan X, Tan TZ, Gruber J, Tolwinski NS
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Submission date Mar 28, 2017
Last update date May 15, 2019
Contact name Jahnavi Suresh
Organization name Yale-NUS college
Department Science
Lab Dr. Nick's lab
Street address 14 Medical Drive
City Singapore
State/province Singapore
ZIP/Postal code 119228
Country Singapore
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (4)
GSM2552933 Glu_In_ChIP-seq
GSM2552934 Glu_IP_ChIP-seq
GSM2552935 Gal_IN_ChIP-seq
This SubSeries is part of SuperSeries:
GSE97238 Trans-Generational Hormesis and the Inheritance of Aging Resistance
Relations
BioProject PRJNA381045
SRA SRP102795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97162_Glu_vs_Gal_peak_compare_table.tsv.gz 987.4 Kb (ftp)(http) TSV
GSE97162_RAW.tar 493.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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