|
| Status |
Public on Apr 20, 2017 |
| Title |
RNAseq profiling of AMCase-expressing lung epithelial cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We have generated novel reporter mice (“ChiaRed”) to study the role of the acidic mammalian chitinase (AMCase) in lung homeostasis and in response to immune challenge.
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| |
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| Overall design |
Lung epithelial cells from wild-type mice (WT; n=3) and AMCase-expressing ChiaRed+ cells were isolated from the lungs of homozygous (CC; n=2) and heterozygous (C+; n=3) ChiaRed mice to compare differentially expressed transcripts by RNA-Seq analysis in these cells.
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| |
|
| Contributor(s) |
Van Dyken SJ, Locksley RM |
| Citation(s) |
28431248 |
| Submission date |
Mar 29, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Steven Van Dyken |
| E-mail(s) |
Steven.Vandyken@ucsf.edu
|
| Organization name |
University of California, San Francisco
|
| Street address |
513 Parnassus Ave
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94143 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (8)
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| Relations |
| BioProject |
PRJNA380960 |
| SRA |
SRP102713 |
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