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Series GSE97385 Query DataSets for GSE97385
Status Public on Sep 21, 2018
Title Vav proteins maintain epithelial traits in breast cancer cells using miR-200c-dependent and independent mechanisms
Platform organism synthetic construct
Sample organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary Here, we report that the Rho GTPase activators Vav2 and Vav3 utilize a new, miR-200c-dependent mechanism that maintains the epithelial state by limiting the abundance of the Zeb2 transcriptional repressor in breast cancer cells. In parallel, Vav proteins engage an expression program that maintains epithelial cell traits in 3D culture.
Depletion of Vav proteins triggers EMT in epithelioid breast cancer cells and, conversely, expression of constitutively active Vav2 restores both miR-200c expression and epithelial traits in mesenchymal breast cancer cells. In silico analyses suggest that the negative Vav-Zeb2 axis is operative in human luminal breast tumors.
 
Overall design 4T1 cells were transduced with empty pLKO lentiviral vector (3 replicates included) and lentiviral shRNAs to Vav2 and Vav3 transcripts (2 independent experiments, 3 replicates each). Knockdown cells were then rescued by reexpressing either Vav2 (3 replicates) or Vav3 (3 replicates).
 
Contributor(s) Lorenzo-Martín LF, Citterio C, Menacho-Márquez M, Larive RM, García-Escudero R, Robles-Valero J, Cuadrado M, Fernández-Pisonero MI, Dosil M, Sevilla MA, Montero MJ, Fernández-Salguero PM, Paramio JM, Bustelo XR
Citation(s) 30087437
Submission date Apr 04, 2017
Last update date Jan 02, 2019
Contact name L. Francisco Lorenzo-Martín
E-mail(s) luis.lorenzomartin@epfl.ch
Organization name École Polytechnique Fédérale de Lausanne (EPFL)
Lab Laboratory of Stem Cell Bioengineering
Street address EPFL – SV – IBI – LSCB – Station 15
City Lausanne
State/province Vaud
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL8786 [miRNA-1] Affymetrix Multispecies miRNA-1 Array
Samples (15)
GSM2563653 4T1 pLKO rep 1
GSM2563654 4T1 pLKO rep 2
GSM2563655 4T1 pLKO rep 3
Relations
BioProject PRJNA381602

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Supplementary file Size Download File type/resource
GSE97385_RAW.tar 2.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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