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Series GSE98299 Query DataSets for GSE98299
Status Public on Apr 28, 2017
Title Transcriptomic analysis of metastatic Sonic Hedgehog subgroup medulloblastomas
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report findings that illuminate a dynamic metastasis pathway in the common pediatric brain tumor medulloblastoma.
 
Overall design We examined the transcriptomes of medulloblastoma driven by ATOH1 in collaboration with aberrant Sonic Hedgehog (SHH) signaling, as well as those of medulloblastoma from Ptch1+/- animals.
 
Contributor(s) Zhao H, Zeng E
Citation(s) 28490517
Submission date Apr 27, 2017
Last update date Jul 25, 2021
Contact name Haotian Zhao
E-mail(s) Haotian.Zhao@sanfordhealth.org
Organization name Sanford Research
Department Children's Health Research Center
Lab Zhao
Street address 2301 E. 60th St. North
City Sioux Falls
State/province SD
ZIP/Postal code 57104
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (9)
GSM2590635 Primary tumor_rep1
GSM2590636 Primary tumor_rep2
GSM2590637 Primary tumor_rep3
This SubSeries is part of SuperSeries:
GSE98302 Sonic Hedgehog subgroup medulloblastomas
Relations
BioProject PRJNA384627
SRA SRP105358

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98299_RAW.tar 2.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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