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Series GSE98685 Query DataSets for GSE98685
Status Public on Aug 29, 2017
Title Enhanced base editing by co-expression of free uracil DNA glycosylase inhibitor
Organism Homo sapiens
Experiment type Other
Summary Even the latest generation of base editor (BE3) causes unwanted indels and non-C-to-T substitutions, compromising the fidelity of base editing outcome. Here we report a enhanced base editing system. The enhanced base edting system decreased the formation of unintended indels and C-to-A/C-to-G substitutions, and increased the frequency of desired C-to-T substitution, thereby improving both the accuracy and efficiency of base editing.
 
Overall design Examination of indels and base substitutions induced by the enhanced base editing system
Web link https://0-www-nature-com.brum.beds.ac.uk/articles/cr2017111
 
Contributor(s) Yang L, Chen J, Yang B, Xue W, Wang L, Yan L
Citation(s) 28849781
Submission date May 09, 2017
Last update date Jul 25, 2021
Contact name Li Yang
E-mail(s) liyang_fudan@fudan.edu.cn
Organization name Fudan University
Department Institutes of Biological Sciences
Street address 131 Dong-An Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (64)
GSM2609977 BE3-1
GSM2609978 BE3-2
GSM2609979 BE3-3_1
Relations
BioProject PRJNA385910
SRA SRP106676

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98685_RAW.tar 62.8 Mb (http)(custom) TAR (of XLSX)
GSE98685_eBE_Indels.xlsx 75.4 Kb (ftp)(http) XLSX
GSE98685_eBE_Indels_update.xlsx 70.8 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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