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Series GSE99314 Query DataSets for GSE99314
Status Public on Sep 22, 2017
Title Genome-wide analysis of YAP and TFCP2 binding DNA in liver cancer cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To seek additional evidence that YAP closely interacts with TFCP2, we performed ChIP-seq assays in Bel-7402 cells using anti-TFCP2 or anti-YAP antibodies. We found that a subset of YAP binding regions overlapped with the TFCP2-occupied sites, suggesting that YAP- and TFCP2-regulated transcriptional outputs are likely correlated.
 
Overall design Examination of YAP and TFCP2 binding DNA in Bel-7402 cells.
 
Contributor(s) Zhang X, Zheng W
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Submission date May 25, 2017
Last update date Jul 25, 2021
Contact name Weisheng Zheng
E-mail(s) wisense@2008.sina.com
Organization name Tongji University
Department Department of Bioinformatics
Lab Jiang Lab
Street address Siping Road, No.1239
City Shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (9)
GSM2641029 input_DNA_rep1
GSM2641030 input_DNA_rep2
GSM2641031 input_DNA_rep3
This SubSeries is part of SuperSeries:
GSE99315 Genome-wide analysis of YAP and TFCP2 occupancy and regulated expression in liver cancer cells
Relations
BioProject PRJNA388095
SRA SRP108060

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99314_RAW.tar 2.9 Gb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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