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Series GSE99958 Query DataSets for GSE99958
Status Public on Jul 11, 2018
Title Next-generation sequencing of PDLSC transcriptome
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary We performed RNA-sequencing and miRNA-sequencing to detect the whole transcriptome of periodontal ligament stem cells (PDLSCs) at different stages during osteogenic differentiation.
 
Overall design PDLSCs were isolated and cultured in osteogenic medium. Total RNA from cells at D0, D3, D7, and D14 were extracted, and submitted to RNA-sequencing and miRNA-sequencing.
 
Contributor(s) Zheng Y, Jia L, Li W
Citation(s) 28598284, 30038865
Submission date Jun 12, 2017
Last update date Jun 17, 2019
Contact name Yunfei Zheng
E-mail(s) cora2005@126.com
Phone +861082195775
Organization name Peking University School and Hospital of Stomatology
Department Oral and Maxillofacial Surgery
Street address 22 Zhongguancun Avenue South, Haidian District
City Beijing
State/province Beijing
ZIP/Postal code 100081
Country China
 
Platforms (2)
GPL17303 Ion Torrent Proton (Homo sapiens)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (8)
GSM2666462 PDlC-D14 mRNA
GSM2666463 PDlC-D3 mRNA
GSM2666464 PDlC-D7 mRNA
Relations
BioProject PRJNA390189
SRA SRP109042

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99958_all.counts.exp.txt.gz 358.5 Kb (ftp)(http) TXT
GSE99958_miRNA.All.Counts.exp.txt.gz 45.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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