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Sample GSM100197 Query DataSets for GSM100197
Status Public on Dec 15, 2006
Title 3BSA H
Sample type RNA
 
Source name 662
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol vehicle: BSA/HCL 1.0 Mm
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 178.3 P 0.013811
AFFX-BioB-M_at 237 P 0.003595
AFFX-BioB-3_at 117.8 P 0.006871
AFFX-BioC-5_at 505.8 P 0.00034
AFFX-BioC-3_at 563.2 P 0.000044
AFFX-BioDn-5_at 1032 P 0.000044
AFFX-BioDn-3_at 2999 P 0.000509
AFFX-CreX-5_at 5776.4 P 0.000052
AFFX-CreX-3_at 7156.8 P 0.000044
AFFX-DapX-5_at 510.7 P 0.00007
AFFX-DapX-M_at 3165.8 P 0.000147
AFFX-DapX-3_at 5334.7 P 0.000044
AFFX-LysX-5_at 181.2 P 0.000127
AFFX-LysX-M_at 822.9 P 0.00034
AFFX-LysX-3_at 1774.7 P 0.000044
AFFX-PheX-5_at 337.6 P 0.000169
AFFX-PheX-M_at 839.1 P 0.000225
AFFX-PheX-3_at 1130.5 P 0.000052
AFFX-ThrX-5_at 294 P 0.006871
AFFX-ThrX-M_at 665 P 0.000044

Total number of rows: 45101

Table truncated, full table size 1214 Kbytes.




Supplementary file Size Download File type/resource
GSM100197.CEL.gz 6.8 Mb (ftp)(http) CEL
GSM100197.EXP.gz 515 b (ftp)(http) EXP
Raw data provided as supplementary file

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