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Sample GSM100289 Query DataSets for GSM100289
Status Public on Dec 15, 2006
Title 3CNP H
Sample type RNA
 
Source name 665
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE p-value: P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 215.8 P 0.015183
AFFX-BioB-M_at 277.1 P 0.002867
AFFX-BioB-3_at 168.4 P 0.000581
AFFX-BioC-5_at 508.5 P 0.000127
AFFX-BioC-3_at 598.1 P 0.000044
AFFX-BioDn-5_at 952.6 P 0.000044
AFFX-BioDn-3_at 2697.1 P 0.000147
AFFX-CreX-5_at 5393.9 P 0.000044
AFFX-CreX-3_at 6494.3 P 0.000044
AFFX-DapX-5_at 249.4 P 0.00007
AFFX-DapX-M_at 1672.8 P 0.00034
AFFX-DapX-3_at 3205.1 P 0.000044
AFFX-LysX-5_at 77.7 P 0.000972
AFFX-LysX-M_at 476.9 P 0.001796
AFFX-LysX-3_at 780 P 0.000044
AFFX-PheX-5_at 125.4 P 0.001593
AFFX-PheX-M_at 355.2 P 0.000857
AFFX-PheX-3_at 648.5 P 0.000147
AFFX-ThrX-5_at 110.3 P 0.018281
AFFX-ThrX-M_at 366.5 P 0.000127

Total number of rows: 45101

Table truncated, full table size 1209 Kbytes.




Supplementary file Size Download File type/resource
GSM100289.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100289.EXP.gz 514 b (ftp)(http) EXP
Raw data provided as supplementary file

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