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Sample GSM100290 Query DataSets for GSM100290
Status Public on Dec 15, 2006
Title 3CNP M
Sample type RNA
 
Source name 666
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE p-value: P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 161.7 P 0.023929
AFFX-BioB-M_at 234.1 P 0.006187
AFFX-BioB-3_at 119.2 M 0.054213
AFFX-BioC-5_at 538.9 P 0.000297
AFFX-BioC-3_at 504.6 P 0.00011
AFFX-BioDn-5_at 894.4 P 0.000044
AFFX-BioDn-3_at 2508.1 P 0.000972
AFFX-CreX-5_at 5050.7 P 0.000052
AFFX-CreX-3_at 6348.4 P 0.000044
AFFX-DapX-5_at 348.9 P 0.000095
AFFX-DapX-M_at 2299.9 P 0.000258
AFFX-DapX-3_at 4566.9 P 0.000044
AFFX-LysX-5_at 161.2 P 0.000195
AFFX-LysX-M_at 664.4 P 0.00141
AFFX-LysX-3_at 1339.3 P 0.000044
AFFX-PheX-5_at 263.9 P 0.00039
AFFX-PheX-M_at 677.9 P 0.000662
AFFX-PheX-3_at 860 P 0.000095
AFFX-ThrX-5_at 157.5 P 0.028457
AFFX-ThrX-M_at 484.6 P 0.000147

Total number of rows: 45101

Table truncated, full table size 1218 Kbytes.




Supplementary file Size Download File type/resource
GSM100290.CEL.gz 6.9 Mb (ftp)(http) CEL
GSM100290.EXP.gz 513 b (ftp)(http) EXP
Raw data provided as supplementary file

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