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Sample GSM100292 Query DataSets for GSM100292
Status Public on Dec 15, 2006
Title 2BSA H
Sample type RNA
 
Source name 678
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol vehicle: BSA/HCL 1.0 Mm
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 128.4 P 0.023929
AFFX-BioB-M_at 206.2 P 0.004017
AFFX-BioB-3_at 92.9 P 0.00762
AFFX-BioC-5_at 436.3 P 0.000581
AFFX-BioC-3_at 459.9 P 0.00006
AFFX-BioDn-5_at 747.1 P 0.000044
AFFX-BioDn-3_at 2031.1 P 0.00039
AFFX-CreX-5_at 3995 P 0.000052
AFFX-CreX-3_at 4848.1 P 0.000044
AFFX-DapX-5_at 239.7 P 0.000095
AFFX-DapX-M_at 1122 P 0.000297
AFFX-DapX-3_at 2078.9 P 0.000044
AFFX-LysX-5_at 55.2 P 0.000972
AFFX-LysX-M_at 308 P 0.004017
AFFX-LysX-3_at 583.5 P 0.000044
AFFX-PheX-5_at 111.8 P 0.003212
AFFX-PheX-M_at 245.8 P 0.000972
AFFX-PheX-3_at 335.2 P 0.000297
AFFX-ThrX-5_at 84.9 P 0.046482
AFFX-ThrX-M_at 273.1 P 0.000297

Total number of rows: 45101

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM100292.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100292.EXP.gz 396 b (ftp)(http) EXP

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