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Sample GSM100322 Query DataSets for GSM100322
Status Public on Dec 15, 2006
Title 2BSA M
Sample type RNA
 
Source name 679
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol vehicle: BSA/HCL 1.0 Mm
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 107 M 0.050229
AFFX-BioB-M_at 94.8 P 0.036569
AFFX-BioB-3_at 42.4 A 0.239063
AFFX-BioC-5_at 239.5 P 0.000972
AFFX-BioC-3_at 237.7 P 0.00011
AFFX-BioDn-5_at 441.5 P 0.000052
AFFX-BioDn-3_at 1460.2 P 0.001796
AFFX-CreX-5_at 2557.4 P 0.000044
AFFX-CreX-3_at 3110.3 P 0.000044
AFFX-DapX-5_at 368.3 P 0.00006
AFFX-DapX-M_at 2723.7 P 0.000095
AFFX-DapX-3_at 4558.4 P 0.000044
AFFX-LysX-5_at 147 P 0.00011
AFFX-LysX-M_at 789.2 P 0.000297
AFFX-LysX-3_at 1972.4 P 0.000044
AFFX-PheX-5_at 263.4 P 0.000195
AFFX-PheX-M_at 819.3 P 0.000225
AFFX-PheX-3_at 1165.6 P 0.00006
AFFX-ThrX-5_at 216.6 P 0.005565
AFFX-ThrX-M_at 667 P 0.00006

Total number of rows: 45101

Table truncated, full table size 1214 Kbytes.




Supplementary file Size Download File type/resource
GSM100322.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100322.EXP.gz 392 b (ftp)(http) EXP
Raw data provided as supplementary file

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