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Sample GSM100325 Query DataSets for GSM100325
Status Public on Dec 15, 2006
Title 2CNP H
Sample type RNA
 
Source name 681
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 94.9 P 0.009337
AFFX-BioB-M_at 128.1 P 0.000972
AFFX-BioB-3_at 72.2 P 0.000297
AFFX-BioC-5_at 308.3 P 0.00007
AFFX-BioC-3_at 314.9 P 0.000044
AFFX-BioDn-5_at 493.3 P 0.000044
AFFX-BioDn-3_at 1320.7 P 0.00006
AFFX-CreX-5_at 2831.2 P 0.000044
AFFX-CreX-3_at 3406.8 P 0.000044
AFFX-DapX-5_at 28.3 P 0.001248
AFFX-DapX-M_at 268 P 0.001102
AFFX-DapX-3_at 544.8 P 0.000044
AFFX-LysX-5_at 10.8 M 0.062929
AFFX-LysX-M_at 85.3 P 0.011384
AFFX-LysX-3_at 208.3 P 0.00007
AFFX-PheX-5_at 12.5 A 0.41138
AFFX-PheX-M_at 41 P 0.006871
AFFX-PheX-3_at 110.9 P 0.000972
AFFX-ThrX-5_at 8.9 A 0.52976
AFFX-ThrX-M_at 55.9 P 0.013811

Total number of rows: 45101

Table truncated, full table size 1195 Kbytes.




Supplementary file Size Download File type/resource
GSM100325.CEL.gz 6.2 Mb (ftp)(http) CEL
GSM100325.EXP.gz 509 b (ftp)(http) EXP
Raw data provided as supplementary file

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