NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM100326 Query DataSets for GSM100326
Status Public on Dec 15, 2006
Title 2CNP M
Sample type RNA
 
Source name 682
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 114.6 P 0.021902
AFFX-BioB-M_at 163.5 P 0.013811
AFFX-BioB-3_at 105.5 P 0.018281
AFFX-BioC-5_at 378.1 P 0.00141
AFFX-BioC-3_at 377.4 P 0.00007
AFFX-BioDn-5_at 653.2 P 0.000044
AFFX-BioDn-3_at 1958.3 P 0.001248
AFFX-CreX-5_at 3698.6 P 0.000052
AFFX-CreX-3_at 4572 P 0.000044
AFFX-DapX-5_at 162.5 P 0.000258
AFFX-DapX-M_at 1010.5 P 0.000662
AFFX-DapX-3_at 1928.9 P 0.000052
AFFX-LysX-5_at 60 P 0.00844
AFFX-LysX-M_at 241.2 P 0.00762
AFFX-LysX-3_at 569.1 P 0.000044
AFFX-PheX-5_at 78.5 P 0.023929
AFFX-PheX-M_at 210 P 0.001102
AFFX-PheX-3_at 301.7 P 0.000195
AFFX-ThrX-5_at 90.6 P 0.036569
AFFX-ThrX-M_at 202.8 P 0.000297

Total number of rows: 45101

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM100326.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100326.EXP.gz 509 b (ftp)(http) EXP
Raw data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap