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Sample GSM100327 Query DataSets for GSM100327
Status Public on Dec 15, 2006
Title 4BSA R/P
Sample type RNA
 
Source name 683
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 95 P 0.01667
AFFX-BioB-M_at 99 P 0.010317
AFFX-BioB-3_at 42.8 A 0.139482
AFFX-BioC-5_at 252.5 P 0.00141
AFFX-BioC-3_at 195.8 P 0.000195
AFFX-BioDn-5_at 403.3 P 0.000044
AFFX-BioDn-3_at 1297 P 0.002275
AFFX-CreX-5_at 2471.1 P 0.000052
AFFX-CreX-3_at 3113.4 P 0.000044
AFFX-DapX-5_at 189.3 P 0.000225
AFFX-DapX-M_at 1265.4 P 0.000446
AFFX-DapX-3_at 2218.9 P 0.000052
AFFX-LysX-5_at 65 P 0.000857
AFFX-LysX-M_at 287.3 P 0.002867
AFFX-LysX-3_at 757.1 P 0.000044
AFFX-PheX-5_at 91.3 P 0.00762
AFFX-PheX-M_at 238.8 P 0.000754
AFFX-PheX-3_at 382.4 P 0.000225
AFFX-ThrX-5_at 76.7 M 0.062929
AFFX-ThrX-M_at 292 P 0.000169

Total number of rows: 45101

Table truncated, full table size 1209 Kbytes.




Supplementary file Size Download File type/resource
GSM100327.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100327.EXP.gz 510 b (ftp)(http) EXP
Raw data provided as supplementary file

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