NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM100330 Query DataSets for GSM100330
Status Public on Dec 15, 2006
Title 4CNP R/P
Sample type RNA
 
Source name 686
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 162 P 0.010317
AFFX-BioB-M_at 261.3 P 0.003595
AFFX-BioB-3_at 116.8 P 0.00141
AFFX-BioC-5_at 495.8 P 0.000169
AFFX-BioC-3_at 528.9 P 0.000052
AFFX-BioDn-5_at 876.1 P 0.000044
AFFX-BioDn-3_at 2274.9 P 0.000127
AFFX-CreX-5_at 4536.9 P 0.000052
AFFX-CreX-3_at 5272.1 P 0.000044
AFFX-DapX-5_at 373.5 P 0.00006
AFFX-DapX-M_at 3269.3 P 0.000095
AFFX-DapX-3_at 5530.2 P 0.000044
AFFX-LysX-5_at 118 P 0.000081
AFFX-LysX-M_at 742.8 P 0.00034
AFFX-LysX-3_at 1922.8 P 0.000044
AFFX-PheX-5_at 259.6 P 0.000147
AFFX-PheX-M_at 817.3 P 0.000095
AFFX-PheX-3_at 1325.8 P 0.000044
AFFX-ThrX-5_at 194.1 P 0.004017
AFFX-ThrX-M_at 775.7 P 0.000044

Total number of rows: 45101

Table truncated, full table size 1206 Kbytes.




Supplementary file Size Download File type/resource
GSM100330.CEL.gz 6.6 Mb (ftp)(http) CEL
GSM100330.EXP.gz 507 b (ftp)(http) EXP
Raw data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap