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Sample GSM100331 Query DataSets for GSM100331
Status Public on Dec 15, 2006
Title 4CNP H
Sample type RNA
 
Source name 687
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 79.3 M 0.062929
AFFX-BioB-M_at 111 P 0.012547
AFFX-BioB-3_at 67.5 A 0.0727
AFFX-BioC-5_at 276.2 P 0.000662
AFFX-BioC-3_at 259.7 P 0.000095
AFFX-BioDn-5_at 457.4 P 0.000052
AFFX-BioDn-3_at 1432.8 P 0.001102
AFFX-CreX-5_at 2538.5 P 0.000052
AFFX-CreX-3_at 3475.3 P 0.000044
AFFX-DapX-5_at 241 P 0.000169
AFFX-DapX-M_at 1329 P 0.000509
AFFX-DapX-3_at 2424.5 P 0.000052
AFFX-LysX-5_at 64.2 P 0.002021
AFFX-LysX-M_at 357.9 P 0.002556
AFFX-LysX-3_at 706.9 P 0.000044
AFFX-PheX-5_at 79.9 P 0.009337
AFFX-PheX-M_at 244.5 P 0.001248
AFFX-PheX-3_at 351.5 P 0.000225
AFFX-ThrX-5_at 88.1 P 0.018281
AFFX-ThrX-M_at 264.3 P 0.000127

Total number of rows: 45101

Table truncated, full table size 1210 Kbytes.




Supplementary file Size Download File type/resource
GSM100331.CEL.gz 6.7 Mb (ftp)(http) CEL
GSM100331.EXP.gz 508 b (ftp)(http) EXP
Raw data provided as supplementary file

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