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Sample GSM100332 Query DataSets for GSM100332
Status Public on Dec 15, 2006
Title 4CNP M
Sample type RNA
 
Source name 688
Organism Mus musculus
Characteristics stage: E15.5
organ: tibiae
mouse strain: CD1
gender: male and female
Biomaterial provider Charles River
Treatment protocol CNP at 10exp(-6) M
Growth protocol 6 days in minimal media
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy lipid extraction kit
Label SAPE
Label protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
 
Hybridization protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Scan protocol According to standard protocols used in London Regional Genomics Facility. Ontario, Canada
Description culture time: 6 days
media: minimal
treatment regime: treat on days 1, 3 and 5
microdissect: day 6
number of tibiae per treatment: 24
Data processing Gene Spring GX
 
Submission date Mar 13, 2006
Last update date Aug 28, 2018
Contact name Claudine James
E-mail(s) claudinegj@hotmail.com, fbeier@uwo.ca
Phone (519)661-3387
Fax (519)850-2459
Organization name University of Western Ontario
Department Physiology and Pharmacology
Lab Frank Beier/ CIHR Group in Skeletal Development and Remodeling
Street address 1151 Richmond Street, Suite 2
City London
State/province Ontario
ZIP/Postal code N6A 5C1
Country Canada
 
Platform ID GPL1261
Series (1)
GSE4481 C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity value:Raw Data
ABS_CALL Present, marginal or absent call from Affymetrix
DETECTION P-VALUE P-value corresponding to signal intensity value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 149.9 P 0.018281
AFFX-BioB-M_at 203.9 P 0.002867
AFFX-BioB-3_at 131.3 P 0.000857
AFFX-BioC-5_at 491.7 P 0.000297
AFFX-BioC-3_at 484.4 P 0.00006
AFFX-BioDn-5_at 797.1 P 0.000044
AFFX-BioDn-3_at 2008.3 P 0.000225
AFFX-CreX-5_at 4296.1 P 0.000052
AFFX-CreX-3_at 4962.8 P 0.000044
AFFX-DapX-5_at 117.8 P 0.00006
AFFX-DapX-M_at 1003.1 P 0.00039
AFFX-DapX-3_at 1741.2 P 0.000044
AFFX-LysX-5_at 51.7 P 0.000972
AFFX-LysX-M_at 228.3 P 0.001593
AFFX-LysX-3_at 437.4 P 0.000044
AFFX-PheX-5_at 84.3 P 0.004484
AFFX-PheX-M_at 194.6 P 0.000972
AFFX-PheX-3_at 270.9 P 0.000297
AFFX-ThrX-5_at 77.6 P 0.033677
AFFX-ThrX-M_at 195.8 P 0.000195

Total number of rows: 45101

Table truncated, full table size 1207 Kbytes.




Supplementary file Size Download File type/resource
GSM100332.CEL.gz 6.6 Mb (ftp)(http) CEL
GSM100332.EXP.gz 506 b (ftp)(http) EXP
Raw data provided as supplementary file

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