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Sample GSM1005533 Query DataSets for GSM1005533
Status Public on Sep 18, 2012
Title ULL-D-188
Sample type RNA
 
Channel 1
Source name Stratagene Reference, ampl. totRNA
Organism Homo sapiens
Characteristics reference: Stratagene Reference, amplified total RNA
Extracted molecule total RNA
Extraction protocol not provided
Label Cy3
Label protocol not provided
 
Channel 2
Source name ULL-D-188, ampl. totRNA
Organism Homo sapiens
Characteristics cell type: primary breast carcinoma
ID: ULL-D-188
Growth protocol A Series of 212 primary breast cancer cases were studied; 80 of these tumors were analyzed using cDNA microarrays, along with one normal breast tissue sample collected from breast reduction surgery. Patient samples were sequentially collected at Ullev?l University Hospital from 1990 to 1994 (IRB approval 350, protocol 75026). The last update of patient information was done in 2006, providing an observation time of 12 to 16 years. Patients were followed until death or emigration, and only 12 patients were lost to follow-up. The average age of the 80 cases analyzed by cDNA microarrays was 65.0 years at time of primary surgery (range 28.2 to 87.7 years), similar to the average age of 64.4 years (range 28.2 to 91.5 years) for the total series. The 80 cases were selected from the total series based only on sufficient amount of fresh frozen tissue for microarray analysis. Consequently, a slightly higher fraction of patients with larger tumor size was observed in this subcohort. A summary of the clinical and histopathological data of the patients is shown in Table 1 (see Additional file 1 for more detailed information). All patients were treated according to Norwegian national guidelines at the time of diagnosis [19]. Patients receiving adjuvant systemic therapy were given nine courses of CMF (cyclophosphamide, methotrexate, 5-fluorouracil) and/or Tamoxifen for two years. Dosage of radiation given as adjuvant treatment was dependent on indication; after breast conserving therapy the mammary gland was given 50 Gy (2 Gy ? 25). The number of samples entered into the survival analyses is smaller than 212 (full dataset) and 80 (subset with gene expression data); excluding patients with missing information or distant metastases at the time of diagnosis and primary surgery, leaves us with a maximum number of 200 (full set) and 77 (subset) patients. <br> Primary breast carcinoma tissue was snap frozen and stored at -80?C. Frozen sections stained with hematoxylin/eosin were reviewed to confirm tumor content, and specimens in which at least 5% of the cells were carcinoma cells were included in this study. The majority of samples (80%) analyzed using microarrays had at least 40% tumor cell content.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from snap frozen tumor tissue using TRIzol? solution (Invitrogen?, Carlsbad, California, USA). The concentration of total RNA was determined using an HP 8453 spectrophotometer (Hewlett Packard) and the integrity of the RNA was assessed using a 2100 Bioanalyzer (Agilent, Santa Clara, California, USA).
Label Cy5
Label protocol Jeffrey Lab RNA Amplification Protocol First strand cDNA synthesis Mix the following contents in 0.2 ml PCR tube and spin briefly: N microl (3 mg) Total RNA 1 microl (0.5 mg/ml) Eberwine primer* 9-N microl RNase-free H2O * Eberwine primer = T7-oligo-dT(15) (5?-AAA CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG CGC TTT TTT TTT TTT TTT-3?) Incubate in PCR machine at 70?C for 3 min, cool on ice for 2 min. Spin briefly. Add the following contents: 4 microl 5X first strand buffer 2 microl 0.1M DTT 1 microl RNasin 2 microl 10mM dNTP mix 2 microl Superscript?II Mix contents, spin briefly, and incubate at 42?C for 1.5 hours. Second strand cDNA synthesis Add the following contents to the first strand synthesis reaction: RNase-free H2O 106 microl 10X Advantage? PCR buffer (Clontech) 15 microl 10mM dNTP mix 3 microl RNase H (2U/microl) 1 microl Advantage? Polymerase Mix (Clontech) 3 microl Incubate in PCR machine at 37?C for 5 min, 94?C for 2 min, 65?C for 1 min, 75?C for 30 min. Stop reaction by adding 7.5 microl of 1M NaOH with 2mM EDTA and incubate in PCR machine at 65?C for 10 min. ds cDNA cleanup If necessary, transfer to a larger tube. Add 150 microl phenol:chloroform:isoamyl alcohol 25:24:1 and mix by pipetting. Transfer to phase lock gel tube and spin at ~16,000g for 5min. Transfer aqueous layer to new tube. Add 1 microl acrylamide (0.1 mg/ml), 70 microl 7.5M NH4Ac, 1 ml 100% EtOH. Spin at ~16,000g for 20 min at room temperature (not at 4?C). Wash pellet with 500 microl 75% EtOH, spin at ~16,000g for 5 min. Air dry, and suspend the pellet in 16 microl RNase-free H2O. In vitro transcription (IVT) Mix at room temperature (the spermidine in the 10X transcription buffer can coprecipitate the template DNA if the reaction is assembled on ice): 16 microl cDNA 4 microl 10X reaction buffer (room temperature) 16 microl 75mM NTP mix (on ice) 4 microl T7 enzyme mix* *Ambion T7 MEGAscript? kit Incubate at 37?C for 5 hours (we have tried incubating for 2-6 hours and achieved the highest correlation between amplified and unamplified samples at 5 hours incubation). aRNA cleanup (using Qiagen RNeasy? mini kit) Add 10 microl b-mercaptoethanol to 1ml buffer RLT before use (stable for 1 month). Transfer IVT reaction into a 1.5 ml new tube, add 60 microl RNase-free H2O, add 350 microl buffer RLT, mix by pipetting. Add 250 microl 100% EtOH, mix by pipetting. Apply sample to RNeasy? column, spin at ~12,000g for 15 sec at room temperature. Transfer column to new collection tube. Add 500 microl buffer RPE, spin at ~12,000g for 15 sec. Discard flow through, add 500 microl buffer RPE, spin at ~12,000g for 2 min. Transfer column to new collection tube, add 30 microl RNase-free H2O to the membrane, spin at ~12,000g for 1 min to elute Measure aRNA yield at A260;
 
 
Hybridization protocol 1. Prepare the reaction for each aRNA sample. aRNA Rhx Primer(8?ug/?ul) ddH2O Total Cy5 X ul(3 ug) 1 ul 16-(X+1) 16 ul Cy3 Y ul(3 ug) 1 ul 16-(Y+1) 16 ul 2. Heat to 70?C for 10 min and cool on ice. 3. Prepare reaction mixture for each Cye dye. 5X First-Strand Buffer 6 ?l 50X dNTPs 0.7 ul Cye Dyes 3 ul 0.1 M DTT 3 ul Superscript II 1.7 ul Total Volume 14.4 ul 4. Add 14.4 ul of reaction mixture to the 16 ul reaction tube, mix well, and incubate at 42?C for 1 hour. 5. Add another 1 ul of SSII to each sample and incubate at 42?C for 1 hour. 6. Add 15 ul of 0.1 N NaOH (with 2mM EDTA) and incubate at 65?C for 8 min. 7. Neutralize by adding 15 ul of 0.1 HCl. 8. Add 450 ?l of TE to a Microcon YM-30 Microcon. Add 15 ul of COT1 (1 mg/ml) DNA. 9. Add Cy5 and Cy3 labeled probe to the same Microcon. 10. Wash 1: Spin column for 7 min at 14,000 x g. Wash 2. Remove flow through and add 500 ?l TE Spin for 7 min. Wash 3. Repeat Wash 2 and concentrate probe to less than or equal to 30-35 ul. 11. Invert the Microcon into a clean 1.5 ml tube and spin for 2 min. at 14,000 RPM to recover the probe. 12. Transfer 26.1 ul of probe to new PCR tube: Sample 26.1ul Poly (A) DNA 2 ul (10 ug/ul) Yeast tRNA 1 ul (10 ug/ul) 20X SSC 5.3 ul 10% SDS 0.6 ul Total hybridization volume 35 ul 13. Denature probe by heating for 2 min at 92?C and 42?C for 20-30 min. 14. Spin briefly and place 35 ul to on array. 15. Place a coverslip (24 X 60 mm size) on to array and add 20-30 ul of 3X SSC to each corner of the hybridization chamber. 16. Hybridize at 65?C for 14-18 hours. 17. Wash slide once with 2X SSC/ 0.05% SDS, for 2 min. 18. Transfer slide to 1X SSC for 2 min. 19. Wash slide in 50?C 0.2X SSC for 2 min, twice. 20. Spin slide in 600RPM for 5min.
Scan protocol Scanner Model: GenePix 4000B
Description Simple annotation: Breast, Primary tumor
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/42021.gif
Data processing VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)
 
Submission date Sep 18, 2012
Last update date Sep 18, 2012
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL3341
Series (1)
GSE40954 TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancer

Data table header descriptions
ID_REF ID_REF
CH1I_MEAN Mean feature pixel intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale
CH2I_MEAN Mean feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale
CH1B_MEDIAN The median feature background intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel; Background
CH2B_MEDIAN The median feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
CH1D_MEAN The mean feature pixel intensity at wavelength 532 nm with the median background subtracted.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel
CH2D_MEAN .The mean feature pixel intensity at wavelength 635 nm with the median background subtracted.; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH1I_MEDIAN Median feature pixel intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale
CH2I_MEDIAN Median feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale
CH1B_MEAN The mean feature background intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Background
CH2B_MEAN The mean feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Background
CH1D_MEDIAN The median feature pixel intensity at wavelength 532 nm with the median background subtracted.; Type: integer; Scale: linear_scale
CH2D_MEDIAN The median feature pixel intensity at wavelength 635 nm with the median background subtracted.; Type: integer; Scale: linear_scale
CH1_PER_SAT The percentage of feature pixels at wavelength 532 nm that are saturated.; Type: integer; Scale: linear_scale
CH2_PER_SAT The percentage of feature pixels at wavelength 635 nm that are saturated.; Type: integer; Scale: linear_scale
CH1I_SD The standard deviation of the feature intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel
CH2I_SD The standard deviation of the feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH1B_SD The standard deviation of the feature background intensity at wavelength 532 nm.; Type: float; Scale: linear_scale; Channel: Cy3 Channel; Background
CH2B_SD The standard deviation of the feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
PERGTBCH1I_1SD The percentage of feature pixels with intensities more than one standard deviation above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
PERGTBCH2I_1SD The percentage of feature pixels with intensities more than one standard deviation above the background pixel intensity, at wavelength 635 nm.; Type: integer; Scale: linear_scale
PERGTBCH1I_2SD The percentage of feature pixels with intensities more than two standard deviations above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
PERGTBCH2I_2SD The percentage of feature pixels with intensities more than two standard deviations above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
SUM_MEAN The sum of the arithmetic mean intensities for each wavelength, with the median background subtracted.; Type: integer; Scale: linear_scale
SUM_MEDIAN The sum of the median intensities for each wavelength, with the median background subtracted.; Type: integer; Scale: linear_scale
RAT1_MEAN Ratio of the arithmetic mean intensities of each spot for each wavelength, with the median background subtracted. Channel 1/Channel 2 ratio, (CH1I_MEAN - CH1B_MEDIAN)/(CH2I_MEAN - CH2B_MEDIAN) or Green/Red ratio.; Type: float; Scale: linear_scale
RAT2_MEAN The ratio of the arithmetic mean intensities of each feature for each wavelength, with the median background subtracted.; Type: float; Scale: linear_scale
RAT2_MEDIAN The ratio of the median intensities of each feature for each wavelength, with the median background subtracted.; Type: float; Scale: linear_scale
PIX_RAT2_MEAN The geometric mean of the pixel-by-pixel ratios of pixel intensities, with the median background subtracted.; Type: float; Scale: linear_scale
PIX_RAT2_MEDIAN The median of pixel-by-pixel ratios of pixel intensities, with the median background subtracted.; Type: float; Scale: linear_scale
RAT2_SD The geometric standard deviation of the pixel intensity ratios.; Type: float; Scale: linear_scale
TOT_SPIX The total number of feature pixels.; Type: integer; Scale: linear_scale
TOT_BPIX The total number of background pixels.; Type: integer; Scale: linear_scale
REGR The regression ratio of every pixel in a 2-feature-diameter circle around the center of the feature.; Type: float; Scale: linear_scale
CORR The correlation between channel1 (Cy3) & Channel 2 (Cy5) pixels within the spot, and is a useful quality control parameter. Generally, high values imply better fit & good spot quality.; Type: float; Scale: linear_scale
DIAMETER The diameter in um of the feature-indicator.; Type: integer; Scale: linear_scale
X_COORD X-coordinate of the center of the spot-indicator associated with the spot, where (0,0) is the top left of the image.; Type: integer; Scale: linear_scale
Y_COORD Y-coordinate of the center of the spot-indicator associated with the spot, where (0,0) is the top left of the image.; Type: integer; Scale: linear_scale
TOP Box top: int(((centerX - radius) - Xoffset) / pixelSize).; Type: integer; Scale: linear_scale
BOT Box bottom: int(((centerX + radius) - Xoffset) / pixelSize).; Type: integer; Scale: linear_scale
LEFT Box left: int(((centerY - radius) - yoffset) / pixelSize).; Type: integer; Scale: linear_scale
RIGHT Box right: int(((centerY + radius) - yoffset) / pixelSize); Type: integer; Scale: linear_scale
FLAG The type of flag associated with a feature: -100 = user-flagged null spot; -50 = software-flagged null spot; 0 = spot valid.; Type: integer; Scale: linear_scale
CH2IN_MEAN Normalized value of mean Channel 2 (usually 635 nm) intensity (CH2I_MEAN/Normalization factor).; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH2BN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) background (CH2B_MEDIAN/Normalization factor).; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
CH2DN_MEAN Normalized value of mean Channel 2 (usually 635 nm) intensity with normalized background subtracted (CH2IN_MEAN - CH2BN_MEDIAN).; Type: integer; Scale: linear_scale; Channel: Cy5 channel
RAT2N_MEAN Type: float; Scale: linear_scale
CH2IN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) intensity (CH2I_MEDIAN/Normalization factor).; Type: integer; Scale: linear_scale
CH2DN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) intensity with normalized background subtracted (CH2IN_MEDIAN - CH2BN_MEDIAN).; Type: integer; Scale: linear_scale
RAT1N_MEAN Ratio of the means of Channel 1 (usually 532 nm) intensity to normalized Channel 2 (usually 635 nm) intensity with median background subtracted (CH1D_MEAN/CH2DN_MEAN). Channel 1/Channel 2 ratio normalized or Green/Red ratio normalized.; Type: float; Scale: linear_scale
RAT2N_MEDIAN Channel 2/Channel 1 ratio normalized, RAT2_MEDIAN/Normalization factor or Red/Green median ratio normalized.; Type: float; Scale: linear_scale
LOG_RAT2N_MEAN Log (base 2) of the ratio of the mean of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm) [log (base 2) (RAT2N_MEAN)].; Type: float; Scale: log_base_2
VALUE Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm) [log (base 2) (RAT2N_MEDIAN)].; Type: float; Scale: log_base_2

Data table
ID_REF CH1I_MEAN CH2I_MEAN CH1B_MEDIAN CH2B_MEDIAN CH1D_MEAN CH2D_MEAN CH1I_MEDIAN CH2I_MEDIAN CH1B_MEAN CH2B_MEAN CH1D_MEDIAN CH2D_MEDIAN CH1_PER_SAT CH2_PER_SAT CH1I_SD CH2I_SD CH1B_SD CH2B_SD PERGTBCH1I_1SD PERGTBCH2I_1SD PERGTBCH1I_2SD PERGTBCH2I_2SD SUM_MEAN SUM_MEDIAN RAT1_MEAN RAT2_MEAN RAT2_MEDIAN PIX_RAT2_MEAN PIX_RAT2_MEDIAN RAT2_SD TOT_SPIX TOT_BPIX REGR CORR DIAMETER X_COORD Y_COORD TOP BOT LEFT RIGHT FLAG CH2IN_MEAN CH2BN_MEDIAN CH2DN_MEAN RAT2N_MEAN CH2IN_MEDIAN CH2DN_MEDIAN RAT1N_MEAN RAT2N_MEDIAN LOG_RAT2N_MEAN VALUE
1 559 724 132 137 427 587 570 700 139 142 438 563 0 0 159 248 40 48 100 100 100 100 1014 1001 .727 1.375 1.285 1.366 1.305 1.404 52 239 1.434 .93 90 1820 8440 83 92 57 66 0 693 131 562 1.316 670 539 .76 1.23 .396 .299
2 2923 1273 132 141 2791 1132 2940 1355 138 147 2808 1214 0 0 1140 437 38 44 100 100 100 98 3923 4022 2.466 .406 .432 .394 .398 1.358 52 296 .394 .97 90 1960 8430 82 91 71 80 0 1219 135 1084 .388 1297 1162 2.576 .414 -1.365 -1.273
3 929 1267 140 154 789 1113 744 884 142 156 604 730 0 0 733 1034 31 43 96 100 93 100 1902 1334 .709 1.411 1.209 1.563 1.424 1.731 32 207 1.436 .96 70 2110 8440 84 91 87 94 0 1213 147 1065 1.35 846 699 .741 1.157 .433 .21
4 369 289 140 154 229 135 353 277 140 154 213 123 0 0 86 82 32 42 96 90 96 68 364 336 1.696 .59 .577 .544 .538 1.733 32 165 .659 .79 60 2250 8440 85 91 102 108 0 277 147 129 .564 265 118 1.772 .553 -.825 -.855
5 2893 2360 136 140 2757 2220 2712 2069 138 145 2576 1929 0 0 1447 1330 28 45 100 100 100 100 4977 4505 1.242 .805 .749 .809 .771 1.318 52 263 .826 .96 80 2400 8440 84 92 116 124 0 2259 134 2125 .771 1981 1847 1.297 .717 -.376 -.48
6 457 475 138 148 319 327 485 473 139 147 347 325 0 0 117 135 27 40 100 100 96 98 646 672 .976 1.025 .937 1.03 .996 1.7 52 253 1.07 .88 80 2550 8440 84 92 131 139 0 455 142 313 .981 453 311 1.019 .897 -.027 -.158
7 1808 1745 140 152 1668 1593 1583 1339 151 161 1443 1187 0 0 864 957 51 59 100 100 98 100 3261 2630 1.047 .955 .823 .983 .919 1.492 52 287 .984 .97 90 2700 8440 83 92 145 154 0 1670 146 1525 .914 1282 1136 1.094 .787 -.129 -.345
8 569 765 142 161 427 604 570 630 156 176 428 469 0 0 213 366 56 69 100 100 96 100 1031 897 .707 1.415 1.096 1.336 1.411 1.373 32 202 1.534 .93 70 2830 8430 83 90 159 166 0 732 154 578 1.354 603 449 .739 1.049 .437 .069
9 576 749 133 142 443 607 597 743 137 150 464 601 0 0 172 206 37 55 100 100 97 98 1050 1065 .73 1.37 1.295 1.425 1.386 1.547 80 320 1.371 .93 100 2990 8440 83 93 174 184 0 717 136 581 1.312 711 575 .762 1.24 .391 .31
10 325 291 136 146 189 145 317 282 137 151 181 136 0 0 53 80 26 47 100 93 100 75 334 317 1.303 .767 .751 .681 .801 2.356 32 190 1.109 .76 70 3130 8430 83 90 189 196 0 279 140 139 .734 270 130 1.362 .719 -.445 -.475
11 1943 3539 134 148 1809 3391 1873 3436 134 152 1739 3288 0 0 586 982 37 52 100 100 100 100 5200 5027 .533 1.875 1.891 1.896 1.869 1.224 52 300 1.939 .95 90 3280 8430 82 91 203 212 0 3388 142 3246 1.794 3289 3147 .557 1.81 .844 .856
12 4686 3014 141 150 4545 2864 5148 2903 311 250 5007 2753 0 0 2259 1518 827 476 96 96 87 90 7409 7760 1.587 .63 .55 .631 .616 1.186 32 209 .639 .98 70 3410 8420 82 89 217 224 0 2885 144 2742 .603 2779 2635 1.658 .526 -.729 -.926
13 1103 1247 138 143 965 1104 1052 1170 251 210 914 1027 0 0 483 471 665 385 71 93 23 75 2069 1941 .874 1.144 1.124 1.307 1.107 2.056 80 327 1.014 .89 100 3570 8440 83 93 232 242 0 1194 137 1057 1.095 1120 983 .913 1.076 .131 .105
14 1244 1639 136 148 1108 1491 943 1188 137 154 807 1040 0 0 1741 2242 29 55 98 98 98 98 2599 1847 .743 1.346 1.289 1.332 1.279 1.458 52 270 1.571 .94 90 3710 8430 82 91 246 255 0 1569 142 1427 1.288 1137 996 .776 1.234 .365 .303
15 1216 2978 140 152 1076 2826 1144 2894 148 168 1004 2742 0 0 382 938 45 70 100 100 100 100 3902 3746 .381 2.626 2.731 2.652 2.6 1.23 52 269 2.654 .96 90 3860 8430 82 91 261 270 0 2851 146 2705 2.514 2770 2625 .398 2.614 1.33 1.386
16 4006 4322 139 145 3867 4177 4145 4359 149 161 4006 4214 0 0 1863 1894 55 73 100 100 100 100 8044 8220 .926 1.08 1.052 1.109 1.037 1.358 52 273 1.071 .97 90 4000 8430 82 91 275 284 0 4137 139 3998 1.034 4173 4034 .967 1.007 .048 .01
17 1873 5223 137 148 1736 5075 1898 5340 145 168 1761 5192 0 0 543 1636 49 83 100 100 100 100 6811 6953 .342 2.923 2.948 2.93 2.997 1.175 52 291 2.95 .98 90 4150 8430 82 91 290 299 0 5000 142 4858 2.798 5112 4970 .357 2.822 1.485 1.497
18 176 174 135 140 41 34 158 165 138 154 23 25 0 0 61 47 30 67 38 23 23 3 75 48 1.206 .829 1.087 .784 .75 2.488 52 243 2.256 .33 80 4310 8420 82 90 307 315 -50 167 134 33 .794 158 24 1.26 1.04 -.333 .057
19 2729 2921 138 153 2591 2768 2732 2766 148 162 2594 2613 0 0 539 697 44 56 100 100 100 100 5359 5207 .936 1.068 1.007 1.059 1.06 1.155 52 265 1.087 .98 90 4450 8420 81 90 320 329 0 2796 146 2650 1.023 2648 2501 .978 .964 .032 -.052
20 2128 2361 139 156 1989 2205 2018 2334 147 161 1879 2178 0 0 613 713 39 53 100 100 100 100 4194 4057 .902 1.109 1.159 1.095 1.113 1.218 52 277 1.122 .98 90 4600 8420 81 90 335 344 0 2260 149 2111 1.061 2234 2085 .942 1.11 .086 .15

Total number of rows: 43104

Table truncated, full table size 9511 Kbytes.




Supplementary data files not provided
Raw data included within Sample table
Processed data included within Sample table

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