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Sample GSM1005538 Query DataSets for GSM1005538
Status Public on Sep 18, 2012
Title ULL-D-167
Sample type RNA
 
Channel 1
Source name Stratagene Reference, ampl. totRNA
Organism Homo sapiens
Characteristics reference: Stratagene Reference, amplified total RNA
Extracted molecule total RNA
Extraction protocol not provided
Label Cy3
Label protocol not provided
 
Channel 2
Source name ULL-D-167, ampl. totRNA
Organism Homo sapiens
Characteristics cell type: primary breast carcinoma
ID: ULL-D-167
Growth protocol A Series of 212 primary breast cancer cases were studied; 80 of these tumors were analyzed using cDNA microarrays, along with one normal breast tissue sample collected from breast reduction surgery. Patient samples were sequentially collected at Ullev?l University Hospital from 1990 to 1994 (IRB approval 350, protocol 75026). The last update of patient information was done in 2006, providing an observation time of 12 to 16 years. Patients were followed until death or emigration, and only 12 patients were lost to follow-up. The average age of the 80 cases analyzed by cDNA microarrays was 65.0 years at time of primary surgery (range 28.2 to 87.7 years), similar to the average age of 64.4 years (range 28.2 to 91.5 years) for the total series. The 80 cases were selected from the total series based only on sufficient amount of fresh frozen tissue for microarray analysis. Consequently, a slightly higher fraction of patients with larger tumor size was observed in this subcohort. A summary of the clinical and histopathological data of the patients is shown in Table 1 (see Additional file 1 for more detailed information). All patients were treated according to Norwegian national guidelines at the time of diagnosis [19]. Patients receiving adjuvant systemic therapy were given nine courses of CMF (cyclophosphamide, methotrexate, 5-fluorouracil) and/or Tamoxifen for two years. Dosage of radiation given as adjuvant treatment was dependent on indication; after breast conserving therapy the mammary gland was given 50 Gy (2 Gy ? 25). The number of samples entered into the survival analyses is smaller than 212 (full dataset) and 80 (subset with gene expression data); excluding patients with missing information or distant metastases at the time of diagnosis and primary surgery, leaves us with a maximum number of 200 (full set) and 77 (subset) patients. <br> Primary breast carcinoma tissue was snap frozen and stored at -80?C. Frozen sections stained with hematoxylin/eosin were reviewed to confirm tumor content, and specimens in which at least 5% of the cells were carcinoma cells were included in this study. The majority of samples (80%) analyzed using microarrays had at least 40% tumor cell content.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from snap frozen tumor tissue using TRIzol? solution (Invitrogen?, Carlsbad, California, USA). The concentration of total RNA was determined using an HP 8453 spectrophotometer (Hewlett Packard) and the integrity of the RNA was assessed using a 2100 Bioanalyzer (Agilent, Santa Clara, California, USA).
Label Cy5
Label protocol Jeffrey Lab RNA Amplification Protocol First strand cDNA synthesis Mix the following contents in 0.2 ml PCR tube and spin briefly: N microl (3 mg) Total RNA 1 microl (0.5 mg/ml) Eberwine primer* 9-N microl RNase-free H2O * Eberwine primer = T7-oligo-dT(15) (5?-AAA CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG CGC TTT TTT TTT TTT TTT-3?) Incubate in PCR machine at 70?C for 3 min, cool on ice for 2 min. Spin briefly. Add the following contents: 4 microl 5X first strand buffer 2 microl 0.1M DTT 1 microl RNasin 2 microl 10mM dNTP mix 2 microl Superscript?II Mix contents, spin briefly, and incubate at 42?C for 1.5 hours. Second strand cDNA synthesis Add the following contents to the first strand synthesis reaction: RNase-free H2O 106 microl 10X Advantage? PCR buffer (Clontech) 15 microl 10mM dNTP mix 3 microl RNase H (2U/microl) 1 microl Advantage? Polymerase Mix (Clontech) 3 microl Incubate in PCR machine at 37?C for 5 min, 94?C for 2 min, 65?C for 1 min, 75?C for 30 min. Stop reaction by adding 7.5 microl of 1M NaOH with 2mM EDTA and incubate in PCR machine at 65?C for 10 min. ds cDNA cleanup If necessary, transfer to a larger tube. Add 150 microl phenol:chloroform:isoamyl alcohol 25:24:1 and mix by pipetting. Transfer to phase lock gel tube and spin at ~16,000g for 5min. Transfer aqueous layer to new tube. Add 1 microl acrylamide (0.1 mg/ml), 70 microl 7.5M NH4Ac, 1 ml 100% EtOH. Spin at ~16,000g for 20 min at room temperature (not at 4?C). Wash pellet with 500 microl 75% EtOH, spin at ~16,000g for 5 min. Air dry, and suspend the pellet in 16 microl RNase-free H2O. In vitro transcription (IVT) Mix at room temperature (the spermidine in the 10X transcription buffer can coprecipitate the template DNA if the reaction is assembled on ice): 16 microl cDNA 4 microl 10X reaction buffer (room temperature) 16 microl 75mM NTP mix (on ice) 4 microl T7 enzyme mix* *Ambion T7 MEGAscript? kit Incubate at 37?C for 5 hours (we have tried incubating for 2-6 hours and achieved the highest correlation between amplified and unamplified samples at 5 hours incubation). aRNA cleanup (using Qiagen RNeasy? mini kit) Add 10 microl b-mercaptoethanol to 1ml buffer RLT before use (stable for 1 month). Transfer IVT reaction into a 1.5 ml new tube, add 60 microl RNase-free H2O, add 350 microl buffer RLT, mix by pipetting. Add 250 microl 100% EtOH, mix by pipetting. Apply sample to RNeasy? column, spin at ~12,000g for 15 sec at room temperature. Transfer column to new collection tube. Add 500 microl buffer RPE, spin at ~12,000g for 15 sec. Discard flow through, add 500 microl buffer RPE, spin at ~12,000g for 2 min. Transfer column to new collection tube, add 30 microl RNase-free H2O to the membrane, spin at ~12,000g for 1 min to elute Measure aRNA yield at A260;
 
 
Hybridization protocol 1. Prepare the reaction for each aRNA sample. aRNA Rhx Primer(8?ug/?ul) ddH2O Total Cy5 X ul(3 ug) 1 ul 16-(X+1) 16 ul Cy3 Y ul(3 ug) 1 ul 16-(Y+1) 16 ul 2. Heat to 70?C for 10 min and cool on ice. 3. Prepare reaction mixture for each Cye dye. 5X First-Strand Buffer 6 ?l 50X dNTPs 0.7 ul Cye Dyes 3 ul 0.1 M DTT 3 ul Superscript II 1.7 ul Total Volume 14.4 ul 4. Add 14.4 ul of reaction mixture to the 16 ul reaction tube, mix well, and incubate at 42?C for 1 hour. 5. Add another 1 ul of SSII to each sample and incubate at 42?C for 1 hour. 6. Add 15 ul of 0.1 N NaOH (with 2mM EDTA) and incubate at 65?C for 8 min. 7. Neutralize by adding 15 ul of 0.1 HCl. 8. Add 450 ?l of TE to a Microcon YM-30 Microcon. Add 15 ul of COT1 (1 mg/ml) DNA. 9. Add Cy5 and Cy3 labeled probe to the same Microcon. 10. Wash 1: Spin column for 7 min at 14,000 x g. Wash 2. Remove flow through and add 500 ?l TE Spin for 7 min. Wash 3. Repeat Wash 2 and concentrate probe to less than or equal to 30-35 ul. 11. Invert the Microcon into a clean 1.5 ml tube and spin for 2 min. at 14,000 RPM to recover the probe. 12. Transfer 26.1 ul of probe to new PCR tube: Sample 26.1ul Poly (A) DNA 2 ul (10 ug/ul) Yeast tRNA 1 ul (10 ug/ul) 20X SSC 5.3 ul 10% SDS 0.6 ul Total hybridization volume 35 ul 13. Denature probe by heating for 2 min at 92?C and 42?C for 20-30 min. 14. Spin briefly and place 35 ul to on array. 15. Place a coverslip (24 X 60 mm size) on to array and add 20-30 ul of 3X SSC to each corner of the hybridization chamber. 16. Hybridize at 65?C for 14-18 hours. 17. Wash slide once with 2X SSC/ 0.05% SDS, for 2 min. 18. Transfer slide to 1X SSC for 2 min. 19. Wash slide in 50?C 0.2X SSC for 2 min, twice. 20. Spin slide in 600RPM for 5min.
Scan protocol Scanner Model: GenePix 4000B
Description Simple annotation: Breast, Primary tumor
Image: http://smd.stanford.edu/MicroArray/gifs/2003-06/42018.gif
Data processing VALUE is Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm)
 
Submission date Sep 18, 2012
Last update date Sep 18, 2012
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL3341
Series (1)
GSE40954 TP53 mutation status and gene expression profiles are powerful prognostic markers of breast cancer

Data table header descriptions
ID_REF ID_REF
CH1I_MEAN Mean feature pixel intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale
CH2I_MEAN Mean feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale
CH1B_MEDIAN The median feature background intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel; Background
CH2B_MEDIAN The median feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
CH1D_MEAN The mean feature pixel intensity at wavelength 532 nm with the median background subtracted.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel
CH2D_MEAN .The mean feature pixel intensity at wavelength 635 nm with the median background subtracted.; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH1I_MEDIAN Median feature pixel intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale
CH2I_MEDIAN Median feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale
CH1B_MEAN The mean feature background intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Background
CH2B_MEAN The mean feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Background
CH1D_MEDIAN The median feature pixel intensity at wavelength 532 nm with the median background subtracted.; Type: integer; Scale: linear_scale
CH2D_MEDIAN The median feature pixel intensity at wavelength 635 nm with the median background subtracted.; Type: integer; Scale: linear_scale
CH1_PER_SAT The percentage of feature pixels at wavelength 532 nm that are saturated.; Type: integer; Scale: linear_scale
CH2_PER_SAT The percentage of feature pixels at wavelength 635 nm that are saturated.; Type: integer; Scale: linear_scale
CH1I_SD The standard deviation of the feature intensity at wavelength 532 nm.; Type: integer; Scale: linear_scale; Channel: Cy3 Channel
CH2I_SD The standard deviation of the feature pixel intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH1B_SD The standard deviation of the feature background intensity at wavelength 532 nm.; Type: float; Scale: linear_scale; Channel: Cy3 Channel; Background
CH2B_SD The standard deviation of the feature background intensity at wavelength 635 nm.; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
PERGTBCH1I_1SD The percentage of feature pixels with intensities more than one standard deviation above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
PERGTBCH2I_1SD The percentage of feature pixels with intensities more than one standard deviation above the background pixel intensity, at wavelength 635 nm.; Type: integer; Scale: linear_scale
PERGTBCH1I_2SD The percentage of feature pixels with intensities more than two standard deviations above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
PERGTBCH2I_2SD The percentage of feature pixels with intensities more than two standard deviations above the background pixel intensity, at wavelength 532 nm.; Type: integer; Scale: linear_scale
SUM_MEAN The sum of the arithmetic mean intensities for each wavelength, with the median background subtracted.; Type: integer; Scale: linear_scale
SUM_MEDIAN The sum of the median intensities for each wavelength, with the median background subtracted.; Type: integer; Scale: linear_scale
RAT1_MEAN Ratio of the arithmetic mean intensities of each spot for each wavelength, with the median background subtracted. Channel 1/Channel 2 ratio, (CH1I_MEAN - CH1B_MEDIAN)/(CH2I_MEAN - CH2B_MEDIAN) or Green/Red ratio.; Type: float; Scale: linear_scale
RAT2_MEAN The ratio of the arithmetic mean intensities of each feature for each wavelength, with the median background subtracted.; Type: float; Scale: linear_scale
RAT2_MEDIAN The ratio of the median intensities of each feature for each wavelength, with the median background subtracted.; Type: float; Scale: linear_scale
PIX_RAT2_MEAN The geometric mean of the pixel-by-pixel ratios of pixel intensities, with the median background subtracted.; Type: float; Scale: linear_scale
PIX_RAT2_MEDIAN The median of pixel-by-pixel ratios of pixel intensities, with the median background subtracted.; Type: float; Scale: linear_scale
RAT2_SD The geometric standard deviation of the pixel intensity ratios.; Type: float; Scale: linear_scale
TOT_SPIX The total number of feature pixels.; Type: integer; Scale: linear_scale
TOT_BPIX The total number of background pixels.; Type: integer; Scale: linear_scale
REGR The regression ratio of every pixel in a 2-feature-diameter circle around the center of the feature.; Type: float; Scale: linear_scale
CORR The correlation between channel1 (Cy3) & Channel 2 (Cy5) pixels within the spot, and is a useful quality control parameter. Generally, high values imply better fit & good spot quality.; Type: float; Scale: linear_scale
DIAMETER The diameter in um of the feature-indicator.; Type: integer; Scale: linear_scale
X_COORD X-coordinate of the center of the spot-indicator associated with the spot, where (0,0) is the top left of the image.; Type: integer; Scale: linear_scale
Y_COORD Y-coordinate of the center of the spot-indicator associated with the spot, where (0,0) is the top left of the image.; Type: integer; Scale: linear_scale
TOP Box top: int(((centerX - radius) - Xoffset) / pixelSize).; Type: integer; Scale: linear_scale
BOT Box bottom: int(((centerX + radius) - Xoffset) / pixelSize).; Type: integer; Scale: linear_scale
LEFT Box left: int(((centerY - radius) - yoffset) / pixelSize).; Type: integer; Scale: linear_scale
RIGHT Box right: int(((centerY + radius) - yoffset) / pixelSize); Type: integer; Scale: linear_scale
FLAG The type of flag associated with a feature: -100 = user-flagged null spot; -50 = software-flagged null spot; 0 = spot valid.; Type: integer; Scale: linear_scale
CH2IN_MEAN Normalized value of mean Channel 2 (usually 635 nm) intensity (CH2I_MEAN/Normalization factor).; Type: integer; Scale: linear_scale; Channel: Cy5 channel
CH2BN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) background (CH2B_MEDIAN/Normalization factor).; Type: integer; Scale: linear_scale; Channel: Cy5 channel; Background
CH2DN_MEAN Normalized value of mean Channel 2 (usually 635 nm) intensity with normalized background subtracted (CH2IN_MEAN - CH2BN_MEDIAN).; Type: integer; Scale: linear_scale; Channel: Cy5 channel
RAT2N_MEAN Type: float; Scale: linear_scale
CH2IN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) intensity (CH2I_MEDIAN/Normalization factor).; Type: integer; Scale: linear_scale
CH2DN_MEDIAN Normalized value of median Channel 2 (usually 635 nm) intensity with normalized background subtracted (CH2IN_MEDIAN - CH2BN_MEDIAN).; Type: integer; Scale: linear_scale
RAT1N_MEAN Ratio of the means of Channel 1 (usually 532 nm) intensity to normalized Channel 2 (usually 635 nm) intensity with median background subtracted (CH1D_MEAN/CH2DN_MEAN). Channel 1/Channel 2 ratio normalized or Green/Red ratio normalized.; Type: float; Scale: linear_scale
RAT2N_MEDIAN Channel 2/Channel 1 ratio normalized, RAT2_MEDIAN/Normalization factor or Red/Green median ratio normalized.; Type: float; Scale: linear_scale
LOG_RAT2N_MEAN Log (base 2) of the ratio of the mean of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm) [log (base 2) (RAT2N_MEAN)].; Type: float; Scale: log_base_2
VALUE Log (base 2) of the ratio of the median of Channel 2 (usually 635 nm) to Channel 1 (usually 532 nm) [log (base 2) (RAT2N_MEDIAN)].; Type: float; Scale: log_base_2

Data table
ID_REF CH1I_MEAN CH2I_MEAN CH1B_MEDIAN CH2B_MEDIAN CH1D_MEAN CH2D_MEAN CH1I_MEDIAN CH2I_MEDIAN CH1B_MEAN CH2B_MEAN CH1D_MEDIAN CH2D_MEDIAN CH1_PER_SAT CH2_PER_SAT CH1I_SD CH2I_SD CH1B_SD CH2B_SD PERGTBCH1I_1SD PERGTBCH2I_1SD PERGTBCH1I_2SD PERGTBCH2I_2SD SUM_MEAN SUM_MEDIAN RAT1_MEAN RAT2_MEAN RAT2_MEDIAN PIX_RAT2_MEAN PIX_RAT2_MEDIAN RAT2_SD TOT_SPIX TOT_BPIX REGR CORR DIAMETER X_COORD Y_COORD TOP BOT LEFT RIGHT FLAG CH2IN_MEAN CH2BN_MEDIAN CH2DN_MEAN RAT2N_MEAN CH2IN_MEDIAN CH2DN_MEDIAN RAT1N_MEAN RAT2N_MEDIAN LOG_RAT2N_MEAN VALUE
1 600 920 128 150 472 770 563 832 132 156 435 682 0 0 249 397 43 56 98 100 94 100 1242 1117 .613 1.631 1.568 1.689 1.666 1.417 52 202 1.667 .96 80 1630 8470 69 77 69 77 0 893 146 747 1.583 807 662 .632 1.521 .663 .605
2 4544 1592 134 153 4410 1439 4493 1520 152 170 4359 1367 0 0 2861 1004 74 107 100 92 100 85 5849 5726 3.065 .326 .314 .307 .324 1.483 80 289 .333 .98 100 1780 8460 67 77 83 93 0 1545 148 1396 .317 1475 1326 3.158 .304 -1.659 -1.716
3 1790 2476 144 159 1646 2317 1761 2149 153 172 1617 1990 0 0 775 1026 45 106 100 100 100 100 3963 3607 .71 1.408 1.231 1.422 1.379 1.201 32 197 1.4 .99 70 1920 8460 68 75 98 105 0 2402 154 2248 1.366 2085 1931 .732 1.194 .45 .256
4 520 371 159 166 361 205 426 282 165 177 267 116 0 0 247 252 41 65 100 75 100 43 566 383 1.761 .568 .434 .409 .468 1.983 32 212 .836 .88 70 2080 8460 68 75 114 121 0 360 161 199 .551 274 113 1.815 .422 -.86 -1.246
5 6773 11471 157 175 6616 11296 6388 10916 165 177 6231 10741 0 0 1901 3404 45 52 100 100 100 100 17912 16972 .586 1.707 1.724 1.692 1.672 1.136 52 284 1.732 .99 90 2220 8460 67 76 127 136 0 11130 170 10961 1.657 10592 10422 .604 1.673 .728 .742
6 751 822 157 169 594 653 802 816 164 180 645 647 0 0 161 199 41 67 100 100 100 100 1247 1292 .91 1.099 1.003 1.091 1.106 1.201 52 235 1.137 .96 80 2370 8460 68 76 143 151 0 798 164 634 1.067 792 628 .937 .973 .093 -.039
7 4685 7760 156 160 4529 7600 4875 7808 160 167 4719 7648 0 0 1494 2444 37 54 100 100 100 100 12129 12367 .596 1.678 1.621 1.677 1.659 1.111 52 278 1.674 .99 90 2510 8460 67 76 156 165 0 7530 155 7374 1.628 7576 7421 .614 1.573 .703 .653
8 1181 1987 143 150 1038 1837 1164 1934 147 155 1021 1784 0 0 418 805 38 50 100 100 100 100 2875 2805 .565 1.77 1.747 1.744 1.689 1.197 52 235 1.814 .99 80 2660 8460 68 76 172 180 0 1928 146 1782 1.717 1877 1731 .582 1.695 .78 .762
9 1165 1032 146 143 1019 889 1086 982 148 153 940 839 0 0 283 318 34 73 100 100 100 100 1908 1779 1.146 .872 .893 .852 .862 1.227 52 277 .883 .96 90 2800 8460 67 76 185 194 0 1001 139 863 .847 953 814 1.181 .866 -.24 -.207
10 1017 1114 144 138 873 976 1022 1101 148 151 878 963 0 0 233 311 28 79 100 100 100 100 1849 1841 .894 1.118 1.097 1.1 1.16 1.273 32 198 1.145 .94 70 2950 8460 68 75 201 208 0 1081 134 947 1.085 1068 934 .922 1.064 .117 .09
11 5773 9963 141 130 5632 9833 6313 10778 146 138 6172 10648 0 0 2167 3707 30 56 100 100 100 100 15465 16820 .573 1.746 1.725 1.742 1.77 1.131 80 338 1.744 .99 110 3100 8460 66 77 214 225 0 9667 126 9541 1.694 10458 10332 .59 1.674 .761 .743
12 9153 11024 129 128 9024 10896 8928 10718 136 135 8799 10590 0 0 4774 5800 29 51 100 100 100 100 19920 19389 .828 1.207 1.204 1.22 1.171 1.16 52 206 1.206 .99 80 3250 8460 68 76 231 239 0 10697 124 10573 1.172 10400 10276 .854 1.168 .228 .224
13 3132 3026 129 130 3003 2896 3392 3238 136 138 3263 3108 0 0 1685 1649 36 66 100 100 100 100 5899 6371 1.037 .964 .952 .974 .947 1.269 120 284 .968 .99 120 3390 8460 66 78 243 255 0 2936 126 2810 .936 3142 3016 1.069 .924 -.096 -.114
14 823 1163 130 125 693 1038 776 1107 131 130 646 982 0 0 274 436 21 42 100 100 100 100 1731 1628 .668 1.498 1.52 1.49 1.493 1.192 80 254 1.525 .98 100 3540 8460 67 77 259 269 0 1128 121 1007 1.453 1074 953 .688 1.475 .539 .561
15 1272 6795 130 128 1142 6667 1338 7222 131 136 1208 7094 0 0 415 2272 20 49 100 100 100 100 7809 8302 .171 5.838 5.873 5.934 5.861 1.169 80 243 5.815 .99 100 3690 8460 67 77 274 284 0 6593 124 6469 5.665 7008 6883 .177 5.698 2.502 2.511
16 9669 8769 127 129 9542 8640 10196 8788 130 135 10069 8659 0 0 4237 3963 28 46 100 100 100 100 18182 18728 1.104 .905 .86 .892 .905 1.152 80 267 .91 .99 100 3820 8460 67 77 287 297 0 8509 125 8384 .879 8527 8402 1.138 .834 -.187 -.261
17 3899 7707 125 128 3774 7579 4195 8694 149 235 4070 8566 0 0 1159 2588 201 945 100 100 100 96 11353 12636 .498 2.008 2.105 1.951 1.977 1.155 52 277 2.118 .98 90 3970 8450 66 75 302 311 0 7478 124 7354 1.949 8436 8312 .513 2.042 .962 1.03
18 159 187 120 129 39 58 150 164 155 267 30 35 0 0 47 96 227 1061 0 0 0 0 97 65 .672 1.487 1.167 1.613 1.194 2.878 52 219 4.84 .98 80 4130 8450 67 75 319 327 -50 181 125 56 1.443 159 34 .693 1.132 .529 .179
19 5808 9403 119 125 5689 9278 6125 10069 130 140 6006 9944 0 0 1688 2888 46 74 100 100 100 100 14967 15950 .613 1.631 1.656 1.611 1.616 1.132 80 248 1.643 .99 100 4270 8450 66 76 332 342 0 9124 121 9003 1.582 9770 9649 .632 1.607 .662 .684
20 4615 3723 126 120 4489 3603 4911 3837 131 127 4785 3717 0 0 1997 1532 33 39 100 100 100 100 8092 8502 1.246 .803 .777 .806 .79 1.171 80 247 .791 .99 100 4420 8450 66 76 347 357 0 3612 116 3496 .779 3723 3607 1.284 .754 -.361 -.408

Total number of rows: 43104

Table truncated, full table size 9430 Kbytes.




Supplementary data files not provided
Raw data included within Sample table
Processed data included within Sample table

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