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Sample GSM1014501 Query DataSets for GSM1014501
Status Public on Oct 01, 2013
Title hepatoblast parental control [HB_CRTL2]
Sample type RNA
 
Source name HB_CRTL2
Organism Mus musculus
Characteristics strain: C57BL/6
cell type: hepatoblast parental control
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using Qiagen mini kit. Quality control and measurement were performed using NanoDrop and Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared using Ambion Totalprep RNA Amplification kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Control sample
SAMPLE 56
Data processing Data was processed by means of Genome Studio v2011 from illumina, Inc.
 
Submission date Oct 03, 2012
Last update date Oct 01, 2013
Contact name Jesper B Andersen
Organization name Copenhagen University
Department Biotech Research and Innovation Centre
Lab Andersen Group
Street address Ole Maaloes Vej 5
City Copenhagen
ZIP/Postal code 2200
Country Denmark
 
Platform ID GPL6885
Series (1)
GSE41312 Modeling Pathogenesis of Primary Liver Cancer in Lineage Specific Cell Types

Data table header descriptions
ID_REF
VALUE Quantile normalized with background noise subtraction
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1733.25 0
ILMN_2721178 497.2571 0
ILMN_3033922 840.9647 0
ILMN_3092673 2223.638 0
ILMN_2816356 59.03511 0
ILMN_2808939 1249.221 0
ILMN_2634564 285.4685 0
ILMN_2737647 23.55302 0.007518797
ILMN_2734484 244.2091 0
ILMN_2952292 45.9351 0
ILMN_2699078 -2.557974 0.5776942
ILMN_1213681 178.6567 0
ILMN_2735413 11.38118 0.1190476
ILMN_2735415 9.923426 0.1403509
ILMN_2891688 441.1442 0
ILMN_2637698 1168.103 0
ILMN_2674228 318.006 0
ILMN_2601546 17.07153 0.04260652
ILMN_1230831 11.90779 0.1152882
ILMN_2848071 15.93266 0.05012531

Total number of rows: 25697

Table truncated, full table size 730 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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